RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 GDF15Q99988 308 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 TRMOQ9BU70 441 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 CHID1Q9BWS9 393 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 RAVER2Q9HCJ3 691 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 AGO4Q9HCK5 861 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 CISHQ9NSE2 258 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 PSAT1Q9Y617 370 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 HSPE1-MOB4S4R3N1 261 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 PABPN1LA6NDY0 278 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 OR5K3A6NET4 321 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 ZSCAN5BA6NJL1 495 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 H0Y858 1186 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 DFNA5O60443 496 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 DGAT1O75907 488 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 MATN4O95460 622 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 NDUFB10O96000 172 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 ALPLP05186 524 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 YES1P07947 543 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 EPHX2P34913 555 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 HTR3AP46098 478 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 NRLP54845 237 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 GP2P55259 537 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 EEFSECP57772 596 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 GALK2Q01415 458 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 GRIK2Q13002 908 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 RFX4Q33E94 735 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 C5orf22Q49AR2 442 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 YIF1BQ5BJH7 314 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 XKR9Q5GH70 373 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 ZC3H12BQ5HYM0 836 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 HEATR6Q6AI08 1181 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 CASC4Q6P4E1 433 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 BEND5Q7L4P6 421 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 PIWIL3Q7Z3Z3 882 aaKnown RBP8.4□□□□□ -1.06
SKA2-201ENST00000330137 STRA8Q7Z7C7 330 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 P2RY8Q86VZ1 359 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 UBQLNLQ8IYU4 475 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 ZNF555Q8NEP9 628 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 SLC39A3Q9BRY0 314 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 BTBD2Q9BX70 525 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 PDLIM7Q9NR12 457 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 TLR9Q9NR96 1032 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 KCNH7Q9NS40 1196 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 WDR70Q9NW82 654 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 PCSK1NQ9UHG2 260 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 DGKBQ9Y6T7 804 aa8.4□□□□□ -1.06
SKA2-201ENST00000330137 GRXCR2A6NFK2 248 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 AGAP5A6NIR3 686 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PDZK1P1A8MUH7 402 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 NME4O00746 187 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ARPC2O15144 300 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 DLGAP3O95886 979 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CFBP00751 764 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 NAGAP17050 411 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ELK4P28324 431 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 NAGLUP54802 743 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 MRPS15P82914 257 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 CLCQ05315 142 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ATAD3CQ5T2N8 411 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 HHIPL2Q6UWX4 724 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ZBTB33Q86T24 672 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 SIX5Q8N196 739 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 SVOPLQ8N434 492 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 FAM109AQ8N4B1 249 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 AADATQ8N5Z0 425 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CHDHQ8NE62 594 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 SLC22A17Q8WUG5 538 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 JPH3Q8WXH2 748 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 MFSD3Q96ES6 412 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PEBP4Q96S96 227 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ZBED2Q9BTP6 218 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CCDC32Q9BV29 185 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CCNB1IP1Q9NPC3 277 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ZNF358Q9NW07 568 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 RABL2AQ9UBK7 228 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 UBIAD1Q9Y5Z9 338 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 KAT6AQ92794 2004 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 C2CD4BA6NLJ0 364 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ERI2A8K979 691 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 SOAT2O75908 522 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 HMGCRP04035 888 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 HTR1AP08908 422 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 SBK3P0C264 359 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 JUNDP17535 347 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 HTR1EP28566 365 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 GMPRP36959 345 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 RPS5P46782 204 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 CLCNKBP51801 687 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 TKTL1P51854 596 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 UGP2Q16851 508 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ADPRMQ3LIE5 342 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 DALRD3Q5D0E6 543 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 STEAP3Q658P3 488 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CCSAPQ6IQ19 270 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 PMF1Q6P1K2 205 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 NEK5Q6P3R8 708 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 HDDC2Q7Z4H3 204 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms