RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 QPCTQ16769 361 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ARSIQ5FYB1 569 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 GKAP1Q5VSY0 366 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 HHATQ5VTY9 493 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ZSWIM9Q86XI8 627 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 LPCAT1Q8NF37 534 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ACMSDQ8TDX5 336 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 NECAB3Q96P71 396 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 SMIM14Q96QK8 99 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 SUN2Q9UH99 717 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ARIH1Q9Y4X5 557 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 TCP11X1B4DZS4 312 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ADAM23O75077 832 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 PGLSO95336 258 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ERVK-10P10266 1014 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 HLA-DPA1P20036 260 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ADRA1DP25100 572 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 NTSR1P30989 418 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 E2F5Q15329 346 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 PDK4Q16654 411 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ARMC12Q5T9G4 340 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 PDPK2PQ6A1A2 396 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 LVRNQ6Q4G3 990 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 GDPD4Q6W3E5 623 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 ZNF687Q8N1G0 1237 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 KCNV2Q8TDN2 545 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 OR8D1Q8WZ84 308 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 FAM129BQ96TA1 746 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 KLF6Q99612 283 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 SUV39H2Q9H5I1 410 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 NSMCE4AQ9NXX6 385 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 TCAF1Q9Y4C2 921 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 MYLKQ15746 1914 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 CKAP5Q14008 2032 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 COPEO14579 308 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 FGF1P05230 155 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 TARSP26639 723 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 NMBRP28336 390 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 MRPS21P82921 87 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 BMPR2Q13873 1038 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 ELAVL3Q14576 367 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 GRM3Q14832 879 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 TEDDM1Q5T9Z0 273 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 MROH9Q5TGP6 573 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 PIGWQ7Z7B1 504 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 KCNMB4Q86W47 210 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 UBALD2Q8IYN6 164 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 SIX5Q8N196 739 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 TXNDC5Q8NBS9 432 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 ECHDC3Q96DC8 303 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 KLHL32Q96NJ5 620 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 RANBP9Q96S59 729 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 GABRG3Q99928 467 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 PAIP2Q9BPZ3 127 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 SARDHQ9UL12 918 aa18.8■□□□□ 0.6
EXOSC3-201ENST00000327304 PRKCGP05129 697 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 PIRTP0C851 137 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 ALADP13716 330 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 TAC1P20366 129 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 CAMK2GQ13555 558 aaPredicted RBP18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 PTPRRQ15256 657 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 POM121L1PQ3SYA9 428 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 FBXO43Q4G163 708 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 MICALCLQ6ZW33 695 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 RPLP0P6Q8NHW5 317 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 PIH1D2Q8WWB5 315 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 RMDN1Q96DB5 314 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 ZNF641Q96N77 438 aaPredicted RBP18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 ADGRE3Q9BY15 652 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 VPS11Q9H270 941 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 C20orf96Q9NUD7 363 aaPredicted RBP18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 MTF2Q9Y483 593 aaPredicted RBP18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 ITGA2BP08514 1039 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 DHRS4L1P0CG22 281 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 CHRNB1P11230 501 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 SLC8A1P32418 973 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 SPRP35270 261 aaPredicted RBP18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 ETV4P43268 484 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 METAP1P53582 386 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 CSE1LP55060 971 aaKnown RBP18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 STARD6P59095 220 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 MSLNQ13421 630 aaPredicted RBP18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 POU6F1Q14863 301 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 KIAA1211LQ6NV74 962 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 Q6ZS52 159 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 PAF1Q8N7H5 531 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 SEC16BQ96JE7 1060 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 RBBP8Q99708 897 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 FOXQ1Q9C009 403 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 PPM1HQ9ULR3 514 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 PSAT1Q9Y617 370 aa18.79■□□□□ 0.6
EXOSC3-201ENST00000327304 HEATR9A2RTY3 570 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 PRNPP04156 253 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 PAMP19021 973 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 FOXN2P32314 431 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 EPHB1P54762 984 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 SDE2Q6IQ49 451 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 TRMT11Q7Z4G4 463 aaKnown RBP18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 CACNA2D3Q8IZS8 1091 aa18.78■□□□□ 0.6
EXOSC3-201ENST00000327304 PIP4K2CQ8TBX8 421 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 246.9 ms