RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 GABPB2Q8TAK5 448 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-201ENST00000318988 CERS2Q96G23 380 aa27.46■■□□□ 1.99
CTDNEP1-201ENST00000318988 ACSS3Q9H6R3 686 aa27.46■■□□□ 1.99
CTDNEP1-201ENST00000318988 NLE1Q9NVX2 485 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-201ENST00000318988 POLR3BQ9NW08 1133 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-201ENST00000318988 ZNF446Q9NWS9 450 aa27.46■■□□□ 1.99
CTDNEP1-201ENST00000318988 RABGEF1Q9UJ41 708 aa27.46■■□□□ 1.99
CTDNEP1-201ENST00000318988 CKAP5Q14008 2032 aa27.45■■□□□ 1.99
CTDNEP1-201ENST00000318988 ATG2BQ96BY7 2078 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 EXOC1LA0A1B0GW35 172 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 RPP40O75818 363 aaKnown RBP27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 ALDH1A2O94788 518 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 VAPBO95292 243 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 THOC5Q13769 683 aaKnown RBP27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 LRIG3Q6UXM1 1119 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 TRIM67Q6ZTA4 783 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 DPPA4Q7L190 304 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 OR13C4Q8NGS5 318 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 OR6P1Q8NGX9 317 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 ZIM3Q96PE6 472 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 MOCS1Q9NZB8 636 aa27.45■■□□□ 1.98
CTDNEP1-201ENST00000318988 A0A0U1RQS6 177 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 PLK4O00444 970 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 ATP8B1O43520 1251 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 RNASEH2AO75792 299 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 MGAT5Q09328 741 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 ZNF449Q6P9G9 518 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 TRMT10BQ6PF06 316 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 KIAA1324Q6UXG2 1013 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 KCNMB4Q86W47 210 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 RASSF3Q86WH2 238 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 CTAGE3PQ8IX95 158 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 PJA1Q8NG27 643 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 OR13J1Q8NGT2 312 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 OR2W6PQ8NHA6 318 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 HDAC10Q969S8 669 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 BPIFA1Q9NP55 256 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 IL17CQ9P0M4 197 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 NCKAP1Q9Y2A7 1128 aa27.44■■□□□ 1.98
CTDNEP1-201ENST00000318988 A0A1W2PP55 124 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 SHBGP04278 402 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 ERVK-10P10266 1014 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 MMP12P39900 470 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 PTPRCAPQ14761 206 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 CDKN3Q16667 212 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 KBTBD12Q3ZCT8 623 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 AADATQ8N5Z0 425 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 CD248Q9HCU0 757 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 FBXL12Q9NXK8 326 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 ZFATQ9P243 1243 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 SIT1Q9Y3P8 196 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 IKBKGQ9Y6K9 419 aa27.43■■□□□ 1.98
CTDNEP1-201ENST00000318988 LHCGRP22888 699 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 DRD3P35462 400 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 ACVR1Q04771 509 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 FZD5Q13467 585 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 UNC5BQ8IZJ1 945 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 PGBD3Q8N328 593 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 MRGPRX1Q96LB2 322 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 TBATAQ96M53 351 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 C19orf43Q9BQ61 176 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 SLC6A17Q9H1V8 727 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 PKD2L2Q9NZM6 624 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 IL1RAPL1Q9NZN1 696 aa27.42■■□□□ 1.98
CTDNEP1-201ENST00000318988 POC1B-GALNT4F8VUJ3 575 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 MAP2K7O14733 419 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 SLC7A4O43246 635 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 ELFN1P0C7U0 828 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 SIGLEC14Q08ET2 396 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 SMAD1Q15797 465 aaKnown RBP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 HSP90AA5PQ58FG0 334 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 PIP5KL1Q5T9C9 394 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 CROCCP2Q86T23 111 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 OTUD6BQ8N6M0 293 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 PPM1NQ8N819 430 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 CALML6Q8TD86 181 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 HMGB4Q8WW32 186 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 CDKN2AIPNLQ96HQ2 116 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 PPCSQ9HAB8 311 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 BCCIPQ9P287 314 aaKnown RBP eCLIP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 ITM2BQ9Y287 266 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 FNDC3AQ9Y2H6 1198 aaKnown RBP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 FAM159BA6NKW6 160 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 CCL22O00626 93 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 AREL1O15033 823 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 NDUFV2P19404 249 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 ARSDP51689 593 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 PTSQ03393 145 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 ZDHHC20Q5W0Z9 365 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 AFTPHQ6ULP2 937 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 KBTBD6Q86V97 674 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 MRRFQ96E11 262 aaKnown RBP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 UHRF1Q96T88 793 aaPredicted RBP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 FAM167BQ9BTA0 163 aa27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 WRAP53Q9BUR4 548 aaKnown RBP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 ROPN1BQ9BZX4 212 aaPredicted RBP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 ROPN1Q9HAT0 212 aaPredicted RBP27.41■■□□□ 1.98
CTDNEP1-201ENST00000318988 RAD18Q9NS91 495 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms