RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LSMEM2Q8N112 164 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 PDZD8Q8NEN9 1154 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 MDGA1Q8NFP4 955 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
RNF4-201ENST00000314289 ILKAPQ9H0C8 392 aaPredicted RBP12.45□□□□□ -0.42
RNF4-201ENST00000314289 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 SEPT3Q9UH03 358 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 TAGLN3Q9UI15 199 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 FAM50BQ9Y247 325 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 ANKRD6Q9Y2G4 727 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 INSL5Q9Y5Q6 135 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 CPQQ9Y646 472 aa12.45□□□□□ -0.42
RNF4-201ENST00000314289 TRIM43BA6NCK2 446 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 A8MX80 341 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 SPECC1L-ADORA2AF8WAN1 911 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 CD3EAPO15446 510 aaKnown RBP12.44□□□□□ -0.42
RNF4-201ENST00000314289 CLDN11O75508 207 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 GLP2RO95838 553 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 CLTBP09497 229 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TFEBP19484 476 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 SEMG2Q02383 582 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 ZNF549Q6P9A3 640 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TADA1Q96BN2 335 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TRIM43Q96BQ3 446 aaPredicted RBP12.44□□□□□ -0.42
RNF4-201ENST00000314289 PSKH2Q96QS6 385 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TUBB6Q9BUF5 446 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 MRPL46Q9H2W6 279 aaKnown RBP12.44□□□□□ -0.42
RNF4-201ENST00000314289 TNFRSF12AQ9NP84 129 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 GTSE1Q9NYZ3 720 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 CLEC4EQ9ULY5 219 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TANC1Q9C0D5 1861 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 ANAPC1Q9H1A4 1944 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 EYSQ5T1H1 3165 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 A0A1B0GVM2 712 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TCAF2A6NFQ2 919 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 INSIG1O15503 277 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 KDELR3O43731 214 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 GABRR2P28476 465 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 CRABP2P29373 138 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 PMLP29590 882 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 HADHAP40939 763 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 POU4F1Q01851 419 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 LRRC36Q1X8D7 754 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 ARMC3Q5W041 872 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TRIM67Q6ZTA4 783 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 GLT6D1Q7Z4J2 308 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 CCDC117Q8IWD4 279 aaPredicted RBP12.44□□□□□ -0.42
RNF4-201ENST00000314289 SREK1Q8WXA9 508 aaKnown RBP12.44□□□□□ -0.42
RNF4-201ENST00000314289 GATA6Q92908 595 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 ZFRQ96KR1 1074 aaKnown RBP12.44□□□□□ -0.42
RNF4-201ENST00000314289 TRAPPC9Q96Q05 1148 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 MGME1Q9BQP7 344 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 COL4A6Q14031 1691 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 ANKRD36A6QL64 1941 aa12.44□□□□□ -0.42
RNF4-201ENST00000314289 SLC7A4O43246 635 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 BNIP3LO60238 219 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 PRAMEF12O95522 483 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CD160O95971 181 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 PRLP01236 227 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CKMP06732 381 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 WDR5P61964 334 aaKnown RBP12.43□□□□□ -0.42
RNF4-201ENST00000314289 PPM1LQ5SGD2 360 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 SH2D4BQ5SQS7 431 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 EPGNQ6UW88 154 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 ARHGAP24Q8N264 748 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 SNX31Q8N9S9 440 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 ADAMTS19Q8TE59 1207 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CDK5RAP1Q96SZ6 601 aaKnown RBP12.43□□□□□ -0.42
RNF4-201ENST00000314289 DRC3Q9H069 523 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 MRPL17Q9NRX2 175 aaKnown RBP12.43□□□□□ -0.42
RNF4-201ENST00000314289 COMMD8Q9NX08 183 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 SPG21Q9NZD8 308 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 ANGPTL2Q9UKU9 493 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CHD5Q8TDI0 1954 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 TMCC1O94876 653 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 FGF1P05230 155 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 LYNP07948 512 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CNPP09543 421 aaKnown RBP12.43□□□□□ -0.42
RNF4-201ENST00000314289 ETS2P15036 469 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 CTPS1P17812 591 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 GSTT1P30711 240 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 FMO4P31512 558 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 RPL14P50914 215 aaKnown RBP12.43□□□□□ -0.42
RNF4-201ENST00000314289 CUL3Q13618 768 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 DBN1Q16643 649 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 RIPOR1Q6ZS17 1223 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 BBS5Q8N3I7 341 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 PAF1Q8N7H5 531 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 BRSK1Q8TDC3 778 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 ZFAND2BQ8WV99 257 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 PLD4Q96BZ4 506 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
RNF4-201ENST00000314289 CDKN2AIPNLQ96HQ2 116 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 MYRFLQ96LU7 910 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 TUBGCP5Q96RT8 1024 aa12.43□□□□□ -0.42
RNF4-201ENST00000314289 TRIB3Q96RU7 358 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms