RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DNAJB4Q9UDY4 337 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 PCDHB12Q9Y5F1 795 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 NUP214P35658 2090 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SMIM35A0A1B0GVV1 85 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 FAM159BA6NKW6 160 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CBX4O00257 560 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SH3BGRLO75368 114 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 LDLRP01130 860 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CDH17Q12864 832 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 FAM110CQ1W6H9 321 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 ANKDD1AQ495B1 522 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CTXN3Q4LDR2 81 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 GLB1LQ6UWU2 654 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 TAS2R42Q7RTR8 314 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 RALGPS2Q86X27 583 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 PSMG2Q969U7 264 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 HNRNPABQ99729 332 aaKnown RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SENP6Q9GZR1 1112 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SEMA4BQ9NPR2 832 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 EXD2Q9NVH0 621 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 NDUFAF1Q9Y375 327 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 AXIN1O15169 862 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 TPD52L2O43399 206 aaKnown RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 DEAF1O75398 565 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SIX3O95343 332 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 AHSGP02765 367 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 YWHAQP27348 245 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 OR1E1P30953 314 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SLC5A2P31639 672 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 XIAPP98170 497 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 SLC10A7Q0GE19 358 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 TRIM25Q14258 630 aaKnown RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CCDC85BQ15834 202 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 PFKFB4Q16877 469 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 LIPMQ5VYY2 423 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 CNTD1Q8N815 330 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 DLG3Q92796 817 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 ZFYVE19Q96K21 471 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 NPY6RQ99463 290 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 KCTD14Q9BQ13 255 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-201ENST00000309428 NMUR1Q9HB89 426 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 GMIPQ9P107 970 aa12.69□□□□□ -0.38
RETREG3-201ENST00000309428 GPR39O43194 453 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 TBC1D4O60343 1298 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 MGEA5O60502 916 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 FYNP06241 537 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CD68P34810 354 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 WNT3AP56704 352 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 NRG1Q02297 640 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CRHR2Q13324 411 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 KCNA10Q16322 511 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 PGAM4Q8N0Y7 254 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 ZNF555Q8NEP9 628 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 PSMA8Q8TAA3 256 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 LZICQ8WZA0 190 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 TBL1YQ9BQ87 522 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 EXOSC4Q9NPD3 245 aaKnown RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 EMCNQ9ULC0 261 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 ATAD5Q96QE3 1844 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 DYTNA2CJ06 578 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 LINC00032P0C843 101 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CCL23P55773 120 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 MYBPC1Q00872 1141 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 PPP1R3AQ16821 1122 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 FAM187BQ17R55 369 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 PAGE2BQ5JRK9 111 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CRYBG2Q8N1P7 616 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CCDC28BQ9BUN5 200 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 C6orf62Q9GZU0 229 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CNTN3Q9P232 1028 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 UXTQ9UBK9 157 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 ST14Q9Y5Y6 855 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 COPG1Q9Y678 874 aaKnown RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 EI24O14681 340 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 KATNA1O75449 491 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 HLA-DQB2P05538 268 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CCNA2P20248 432 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 PRKCHP24723 683 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 LHX1P48742 406 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 AGAP9Q5VTM2 703 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 NEPROQ6NW34 567 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 UGT2A3Q6UWM9 527 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 ZDHHC17Q8IUH5 632 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 CPNE9Q8IYJ1 553 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 ACMSDQ8TDX5 336 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 TRPC4APQ8TEL6 797 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 COX4I2Q96KJ9 171 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 PRICKLE1Q96MT3 831 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 FANCEQ9HB96 536 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 SLC38A7Q9NVC3 462 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 DNAJC28Q9NX36 388 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 GMPR2Q9P2T1 348 aaKnown RBP12.68□□□□□ -0.38
RETREG3-201ENST00000309428 LRFN2Q9ULH4 789 aa12.68□□□□□ -0.38
RETREG3-201ENST00000309428 RANBP2P49792 3224 aaKnown RBP12.67□□□□□ -0.38
RETREG3-201ENST00000309428 KLF11O14901 512 aa12.67□□□□□ -0.38
RETREG3-201ENST00000309428 HS6ST1O60243 411 aa12.67□□□□□ -0.38
RETREG3-201ENST00000309428 MPOP05164 745 aa12.67□□□□□ -0.38
RETREG3-201ENST00000309428 KRT8P05787 483 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms