RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PNPLA1Q8N8W4 532 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 HDAC10Q969S8 669 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 EID2BQ96D98 161 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ATXN7L3BQ96GX2 97 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 TBATAQ96M53 351 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 RBBP8Q99708 897 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 CAPS2Q9BXY5 557 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 CPEB1Q9BZB8 566 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ZDHHC6Q9H6R6 413 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ATP13A3Q9H7F0 1226 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SUDS3Q9H7L9 328 aaPredicted RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 CNOT10Q9H9A5 744 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 KCNK9Q9NPC2 374 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SENP1Q9P0U3 644 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 DEC1Q9P2X7 70 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 EPS15L1Q9UBC2 864 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 RIMKLBQ9ULI2 386 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 NUMBLQ9Y6R0 609 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 HELZ2Q9BYK8 2649 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 BPTFQ12830 3046 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 BRWD1Q9NSI6 2320 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 WASH3PC4AMC7 463 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ANHXE9PGG2 379 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 PRPF4O43172 522 aaKnown RBP eCLIP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SHOX2O60902 331 aaPredicted RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 RPP40O75818 363 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 POP4O95707 220 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SLC4A1P02730 911 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 AHSGP02765 367 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ALDOAP04075 364 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ATP5BP06576 529 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 CTSLP07711 333 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SRPRAP08240 638 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 PYGBP11216 843 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 PSMA3P25788 255 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SERPINA4P29622 427 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 MDH1P40925 334 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 CCNFP41002 786 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 GRIA4P48058 902 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SOX9P48436 509 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 LIMK2P53671 638 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 CSE1LP55060 971 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SLC18A2Q05940 514 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 CCDC85BQ15834 202 aaPredicted RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ZNF789Q5FWF6 425 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 TIFABQ6ZNK6 161 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 PLPP6Q8IY26 295 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ANKRD42Q8N9B4 389 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 BANPQ8N9N5 519 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 TERB1Q8NA31 727 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 C2CD4AQ8NCU7 369 aaPredicted RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ACVR1CQ8NER5 493 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 OR4K2Q8NGD2 314 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 GRIN3AQ8TCU5 1115 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 MGARPQ8TDB4 240 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 STYXQ8WUJ0 223 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 PTPRN2Q92932 1015 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 PEX13Q92968 403 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ECHDC3Q96DC8 303 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 MTBPQ96DY7 904 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 NECTIN4Q96NY8 510 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 TUBGCP5Q96RT8 1024 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SMC6Q96SB8 1091 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 TRMT61BQ9BVS5 477 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 C12orf65Q9H3J6 166 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 MFSD1Q9H3U5 465 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 SUV39H2Q9H5I1 410 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 RABEP2Q9H5N1 569 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 MLXIPLQ9NP71 852 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 NLE1Q9NVX2 485 aaPredicted RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 POLR3BQ9NW08 1133 aaPredicted RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 MARCH4Q9P2E8 410 aaPredicted RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 HCN2Q9UL51 889 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 MTO1Q9Y2Z2 717 aaKnown RBP6.98□□□□□ -1.29
PTCD2-201ENST00000308077 ZNF711Q9Y462 761 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 WASF2Q9Y6W5 498 aa6.98□□□□□ -1.29
PTCD2-201ENST00000308077 A0A0J9YYE9 177 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 CCDC162PA2VCL2 907 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 FAM47DPA6NHR8 397 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 SLC7A4O43246 635 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 CRTAMO95727 393 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 GOT2P00505 430 aaKnown RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 TRBC1P01850 177 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 UGT2B4P06133 528 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 PRSS56P0CW18 603 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 HLA-EP13747 358 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 CNTFP26441 200 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 RPA3P35244 121 aaPredicted RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 SPRP35270 261 aaPredicted RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 HNF1BP35680 557 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 GMPRP36959 345 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 NEK3P51956 506 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 EPHB1P54762 984 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 RPL26P61254 145 aaKnown RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 GNGT1P63211 74 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 THOC5Q13769 683 aaKnown RBP6.97□□□□□ -1.29
PTCD2-201ENST00000308077 SEMA3AQ14563 771 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 LRRC14Q15048 493 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 CDKN3Q16667 212 aa6.97□□□□□ -1.29
PTCD2-201ENST00000308077 LGSNQ5TDP6 509 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms