RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PPP6CO00743 305 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 EDN1P05305 212 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 GSNP06396 782 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 TSHRP16473 764 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 AZGP1P25311 298 aaKnown RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 PIGAP37287 484 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 NOVP48745 357 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 PRKAA1Q13131 559 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 INPP5AQ14642 412 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 DACT2Q5SW24 774 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 ATAD3CQ5T2N8 411 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 NLGN4XQ8N0W4 816 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 OR5H6Q8NGV6 325 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 RDH11Q8TC12 318 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 ARNTL2Q8WYA1 636 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 CENPNQ96H22 339 aaPredicted RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 KCTD14Q9BQ13 255 aaPredicted RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 LPIN3Q9BQK8 851 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 CLSTN3Q9BQT9 956 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 SNRNP25Q9BV90 132 aaKnown RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 VRTNQ9H8Y1 702 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 MKS1Q9NXB0 559 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 MTF2Q9Y483 593 aaPredicted RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 DNAH12Q6ZR08 3092 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 LOC100506127A0A0U1RQW1 187 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 ERVH48-1M5A8F1 160 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 ARPC2O15144 300 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 TRIM24O15164 1050 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 SEC14L2O76054 403 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 TOMM70O94826 608 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 PTGER2P43116 358 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 FLCNQ8NFG4 579 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 SLC7A3Q8WY07 619 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 EGLN2Q96KS0 407 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 MYOCQ99972 504 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 SMOC2Q9H3U7 446 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 ZNF277Q9NRM2 450 aaPredicted RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 PTBP2Q9UKA9 531 aaKnown RBP14.44□□□□□ -0.1
CDT1-201ENST00000301019 SNX8Q9Y5X2 465 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 LAMB1P07942 1786 aa14.44□□□□□ -0.1
CDT1-201ENST00000301019 KRT87PA6NCN2 255 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 USP2O75604 605 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 PGRP06401 933 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 HTR1AP08908 422 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 KCNA5P22460 613 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 CD68P34810 354 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 NIPAL4Q0D2K0 466 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 TP53BP2Q13625 1128 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 CSHL1Q14406 222 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 HERC3Q15034 1050 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 RPS6KA2Q15349 733 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 ZNF699Q32M78 642 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 LIPMQ5VYY2 423 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 DENND6AQ8IWF6 608 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 MFSD4AQ8N468 514 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 CNTD1Q8N815 330 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 MCFD2Q8NI22 146 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 VPS39Q96JC1 886 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 AMBNQ9NP70 447 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 AGPAT4Q9NRZ5 378 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 ENPP5Q9UJA9 477 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 B3GNT3Q9Y2A9 372 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 USP34Q70CQ2 3546 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 SLC12A8A0AV02 714 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 K7ERI5 159 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 DFFAO00273 331 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 EXTL3O43909 919 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 SPRP35270 261 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 GP2P55259 537 aaKnown RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 PPP2R2BQ00005 443 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 ALDH6A1Q02252 535 aaKnown RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 CTF1Q16619 201 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 GTF2IRD2BQ6EKJ0 949 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 TTC23LQ6PF05 361 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 LINC00523Q86TU6 105 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 GTF2IRD2Q86UP8 949 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 DCBLD1Q8N8Z6 715 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 ZBTB20Q9HC78 741 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 UTS2RQ9UKP6 389 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 ANGPTL3Q9Y5C1 460 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 YDJCA8MPS7 323 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 CENPXA8MT69 81 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 FAM155AB1AL88 458 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 VWA5AO00534 786 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 PGLSO95336 258 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 POLBP06746 335 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 ATF4P18848 351 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 CLCNKBP51801 687 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 GNG2P59768 71 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 STX1BP61266 288 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 CD83Q01151 205 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 TAB1Q15750 504 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 KDM1BQ8NB78 822 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 FYTTD1Q96QD9 318 aaKnown RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 FTHL17Q9BXU8 183 aa14.43□□□□□ -0.1
CDT1-201ENST00000301019 GLIS2Q9BZE0 524 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 CCM2LQ9NUG4 571 aaPredicted RBP14.43□□□□□ -0.1
CDT1-201ENST00000301019 ASNSD1Q9NWL6 643 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms