RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 IL31Q6EBC2 164 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 CHSY3Q70JA7 882 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 NTAN1Q96AB6 310 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 TAMM41Q96BW9 452 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 TMEM209Q96SK2 561 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 DNAI2Q9GZS0 605 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 ZBTB26Q9HCK0 441 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 TTC3P53804 2025 aa15.63■□□□□ 0.09
UBAP1-201ENST00000297661 CCDC162PA2VCL2 907 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 KRBA1A5PL33 1030 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 MYADML2A6NDP7 307 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 TCAF2A6NFQ2 919 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 TMEM114B3SHH9 223 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 SLC22A2O15244 555 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 DLX3O60479 287 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 CYBAP13498 195 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 HNRNPLP14866 589 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 AXLP30530 894 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 ADAM17P78536 824 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 TRAF2Q12933 501 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 PCSK7Q16549 785 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 TRIM16LQ309B1 348 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 C6orf183Q5T699 404 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 MFSD4BQ5TF39 518 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 LIPMQ5VYY2 423 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 PCDH20Q8N6Y1 951 aaKnown RBP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 TNIP2Q8NFZ5 429 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 TRUB1Q8WWH5 349 aaKnown RBP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 MYLPFQ96A32 169 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 DEFB118Q96PH6 123 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 ZNF385DQ9H6B1 395 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 POLR1BQ9H9Y6 1135 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 CYP4F12Q9HCS2 524 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 CNGB3Q9NQW8 809 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 ATAD3AQ9NVI7 634 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 SMOXQ9NWM0 555 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 SFMBT1Q9UHJ3 866 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 RBMX2Q9Y388 322 aaKnown RBP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 HHLA1C9JL84 531 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 AQP9O43315 295 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 MOCS2O96007 188 aaPredicted RBP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 GNRH1P01148 92 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 GJA9P57773 515 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 SCAPQ12770 1279 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 HERC3Q15034 1050 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 PPP4R4Q6NUP7 873 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 FBXO46Q6PJ61 603 aaPredicted RBP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 CYP2R1Q6VVX0 501 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 ZYG11AQ6WRX3 759 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 LSMEM2Q8N112 164 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 SLAIN1Q8ND83 568 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 ACDQ96AP0 544 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 SLC9A7Q96T83 725 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 GPR22Q99680 433 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 MCMBPQ9BTE3 642 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 TMLHEQ9NVH6 421 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 SUCOQ9UBS9 1254 aaKnown RBP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 CROTQ9UKG9 612 aa15.62■□□□□ 0.09
UBAP1-201ENST00000297661 CNOT6Q9ULM6 557 aaKnown RBP15.62■□□□□ 0.09
UBAP1-201ENST00000297661 LRPAP1P30533 357 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 TTKP33981 857 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 BRCC3P46736 316 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 NPY2RP49146 381 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 PLK1P53350 603 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 PSME3P61289 254 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 PCYOX1LQ8NBM8 494 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 SREK1Q8WXA9 508 aaKnown RBP15.61■□□□□ 0.09
UBAP1-201ENST00000297661 LPGAT1Q92604 370 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 TSNARE1Q96NA8 513 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 DRC3Q9H069 523 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 TRHDEQ9UKU6 1024 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 RAP2CQ9Y3L5 183 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 C1orf232A0A0U1RR37 186 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 F8W810 466 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 CCL22O00626 93 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 SNAP91O60641 907 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 TIPRLO75663 272 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 PABPC1P11940 636 aaKnown RBP15.61■□□□□ 0.09
UBAP1-201ENST00000297661 JAK1P23458 1154 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 SLC7A1P30825 629 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 ETFBP38117 255 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 CRYBB1P53674 252 aaPredicted RBP15.61■□□□□ 0.09
UBAP1-201ENST00000297661 MAPK10P53779 464 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 CDC42EP1Q00587 391 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 PRKCQQ04759 706 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 TIGD5Q53EQ6 642 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 LRRC8EQ6NSJ5 796 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 GALNT18Q6P9A2 607 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 ZC3H7AQ8IWR0 971 aaKnown RBP15.61■□□□□ 0.09
UBAP1-201ENST00000297661 ELMO2Q96JJ3 720 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 RHOJQ9H4E5 214 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 CHST12Q9NRB3 414 aa15.61■□□□□ 0.09
UBAP1-201ENST00000297661 MTF2Q9Y483 593 aaPredicted RBP15.61■□□□□ 0.09
UBAP1-201ENST00000297661 RANBP2P49792 3224 aaKnown RBP15.61■□□□□ 0.09
UBAP1-201ENST00000297661 TTC24A2A3L6 582 aaPredicted RBP15.6■□□□□ 0.09
UBAP1-201ENST00000297661 E7ENX8 843 aa15.6■□□□□ 0.09
UBAP1-201ENST00000297661 NCAM2O15394 837 aa15.6■□□□□ 0.09
UBAP1-201ENST00000297661 MT-CO1P00395 513 aa15.6■□□□□ 0.09
UBAP1-201ENST00000297661 POMCP01189 267 aa15.6■□□□□ 0.09
UBAP1-201ENST00000297661 S100A1P23297 94 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms