RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TLCD1Q96CP7 247 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 EID2BQ96D98 161 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 CERS2Q96G23 380 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 HDAC8Q9BY41 377 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 MKRN2Q9H000 416 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 PPCSQ9HAB8 311 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 PCDH12Q9NPG4 1184 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 NLE1Q9NVX2 485 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 CTNNAL1Q9UBT7 734 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 LGALS13Q9UHV8 139 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 CDH16O75309 829 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 CLDN7O95471 211 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 CYP2A6P11509 494 aaPredicted RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 C5AR1P21730 350 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 PSMA3P25788 255 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 SUOXP51687 545 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 RPS14P62263 151 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 FZD5Q13467 585 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 PTPRCAPQ14761 206 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 UBXN2BQ14CS0 331 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 KLHL38Q2WGJ6 581 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 KBTBD12Q3ZCT8 623 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 ERN2Q76MJ5 926 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 OR4K2Q8NGD2 314 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 OR13C4Q8NGS5 318 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 DNAJC1Q96KC8 554 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 C19orf43Q9BQ61 176 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 DHRS4Q9BTZ2 278 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 PPANQ9NQ55 473 aaKnown RBP18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 B4GALT6Q9UBX8 382 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 SLC24A2Q9UI40 661 aa18.93■□□□□ 0.62
PDLIM3-202ENST00000284770 ATG2BQ96BY7 2078 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 FAM159BA6NKW6 160 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 FAM170BA6NMN3 283 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 A8MX80 341 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 MID1O15344 667 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 RGS16O15492 202 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 PIAS1O75925 651 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 VAPBO95292 243 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 SLC4A1P02730 911 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 ERVK-10P10266 1014 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 ARNTP27540 789 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 ARCN1P48444 511 aaKnown RBP18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 NEK3P51956 506 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 SEMG2Q02383 582 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 RASA2Q15283 850 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 LRRC66Q68CR7 880 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 PDPK2PQ6A1A2 396 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 ERAP2Q6P179 960 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 Q6ZS52 159 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 TSPAN33Q86UF1 283 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 TMPRSS6Q8IU80 811 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 RIBC1Q8N443 379 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 C20orf96Q9NUD7 363 aaPredicted RBP18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 IL1RAPL1Q9NZN1 696 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 IL17CQ9P0M4 197 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 PKP3Q9Y446 797 aa18.92■□□□□ 0.62
PDLIM3-202ENST00000284770 CHURC1-FNTBB4DL54 471 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 POC1B-GALNT4F8VUJ3 575 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 STX7O15400 261 aaKnown RBP18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 C7P10643 843 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 ADRB3P13945 408 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 LHCGRP22888 699 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 VIPR1P32241 457 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 MGAT5Q09328 741 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 CRY1Q16526 586 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 TMEM92Q6UXU6 159 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 KCNMB4Q86W47 210 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 HDAC10Q969S8 669 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 CDKN2AIPNLQ96HQ2 116 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 FOXQ1Q9C009 403 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 SMYD2Q9NRG4 433 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 POLR3BQ9NW08 1133 aaPredicted RBP18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 VPS18Q9P253 973 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 BCCIPQ9P287 314 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 SLC7A4O43246 635 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 RPP40O75818 363 aaKnown RBP18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 ZNF30P17039 623 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 DRD3P35462 400 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 HADHAP40939 763 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 P2RY2P41231 377 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 ARSDP51689 593 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 TMPRSS15P98073 1019 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 PTSQ03393 145 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 CNTN1Q12860 1018 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 ARHGEF7Q14155 803 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 HSP90AA5PQ58FG0 334 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 DPPA4Q7L190 304 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 CYP4X1Q8N118 509 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 AADATQ8N5Z0 425 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 CDKL2Q92772 493 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 RAB7BQ96AH8 199 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 TBATAQ96M53 351 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 PAFAH2Q99487 392 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 TBC1D17Q9HA65 648 aa18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 NOVA2Q9UNW9 492 aaKnown RBP18.91■□□□□ 0.62
PDLIM3-202ENST00000284770 CXorf49A8MYA2 514 aaPredicted RBP18.9■□□□□ 0.62
PDLIM3-202ENST00000284770 PLK4O00444 970 aa18.9■□□□□ 0.62
PDLIM3-202ENST00000284770 CCL22O00626 93 aa18.9■□□□□ 0.62
PDLIM3-202ENST00000284770 AREL1O15033 823 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms