RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 MMP8P22894 467 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 IGFBP5P24593 272 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CAPGP40121 348 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CCL15Q16663 113 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CDK20Q8IZL9 346 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF781Q8N8C0 355 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLITRK2Q9H156 845 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 MED28Q9H204 178 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 STXBP5LQ9Y2K9 1186 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 NDUFS2O75306 463 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 DHFRP00374 187 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CHRNB2P17787 502 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 BDNFP23560 247 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 PSMD4P55036 377 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 ACTR3P61158 418 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 TAF1CQ15572 869 aaPredicted RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 TMEM214Q6NUQ4 689 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 MON1BQ7L1V2 547 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 WNT8BQ93098 351 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 MRPL48Q96GC5 212 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 B3GNT5Q9BYG0 378 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 N6AMT1Q9Y5N5 214 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 AZIN1O14977 448 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 B4GALT5O43286 388 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 PRKD3O94806 890 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 BMP10O95393 424 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 ALDH1A1P00352 501 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 RHOCP08134 193 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 WDR4P57081 412 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 RAB25P57735 213 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 RHAGQ02094 409 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CCNYL2Q5T2Q4 361 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 VSIG10LQ86VR7 867 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 PHF10Q8WUB8 498 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 SELENOMQ8WWX9 145 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CPXM1Q96SM3 734 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 PNPLA8Q9NP80 782 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 KLHL28Q9NXS3 571 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 LGALS13Q9UHV8 139 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 H3BMM5 538 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CST3P01034 146 aaPredicted RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 GRK4P32298 578 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 NOS2P35228 1153 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CDKN2BP42772 138 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 CPT1AP50416 773 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 GTF2A2P52657 109 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 FSCN1Q16658 493 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 MEIOBQ8N635 442 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 ACO2Q99798 780 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC7A5P2Q9GIP4 190 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 PCDHAC1Q9H158 963 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 TTYH1Q9H313 450 aaPredicted RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 SIX2Q9NPC8 291 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 MALT1Q9UDY8 824 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 LNPEPQ9UIQ6 1025 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 VPS28Q9UK41 221 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 TRAF6Q9Y4K3 522 aa9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 POLR3HQ9Y535 204 aaPredicted RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 COL5A2P05997 1499 aaPredicted RBP9.76□□□□□ -0.85
CTDSPL2-201ENST00000260327 NOBOXO60393 691 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 TGFB3P10600 412 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 UBA1P22314 1058 aaKnown RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 RHOAP61586 193 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 LSM12Q3MHD2 195 aaKnown RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CERCAMQ5T4B2 595 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 RNASEH2BQ5TBB1 312 aaKnown RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC27A1Q6PCB7 646 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC22A16Q86VW1 577 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 STX12Q86Y82 276 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 KIAA0319LQ8IZA0 1049 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 GALNT6Q8NCL4 622 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 STAG3L4Q8TBR4 150 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 EXD2Q9NVH0 621 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 PDP1Q9P0J1 537 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CD86P42081 329 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CXCL9Q07325 125 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 PRKG2Q13237 762 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 TSC22D1Q15714 1073 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 BICRALQ6AI39 1079 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 OR2T12Q8NG77 320 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZFAND2BQ8WV99 257 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 TRNT1Q96Q11 434 aaKnown RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 ZNF670Q9BS34 389 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CATSPERZQ9NTU4 200 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 TMEM216Q9P0N5 145 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 MLXQ9UH92 298 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 PDE10AQ9Y233 779 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 WNT10BO00744 389 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 SLC22A3O75751 556 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 LRIG2O94898 1065 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 TBX4P57082 545 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 ST8SIA6P61647 398 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 KCNA10Q16322 511 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 SFT2D3Q587I9 215 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 PPP1R26Q5T8A7 1209 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 TMEM53Q6P2H8 277 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 AADATQ8N5Z0 425 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 CLHC1Q8NHS4 586 aa9.75□□□□□ -0.85
CTDSPL2-201ENST00000260327 COPS5Q92905 334 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms