RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 PDGFAP04085 211 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 ACRP10323 421 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 RFX1P22670 979 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 F8A1P23610 371 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 MLLT10P55197 1068 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 GPNMBQ14956 572 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 Q3ZCU0 254 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 MTERF2Q49AM1 385 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 PIGGQ5H8A4 983 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 MDH1BQ5I0G3 518 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 ISLR2Q6UXK2 745 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 CPNE9Q8IYJ1 553 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 CADM2Q8N3J6 435 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 FNDC5Q8NAU1 212 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 PSD4Q8NDX1 1056 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 OLIG1Q8TAK6 271 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 GRIN3AQ8TCU5 1115 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 ERLEC1Q96DZ1 483 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 SH2D3AQ9BRG2 576 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 FAM49AQ9H0Q0 323 aaPredicted RBP11.86□□□□□ -0.51
CCNA1-201ENST00000255465 SLC6A17Q9H1V8 727 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 TRIM39Q9HCM9 518 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 IL23AQ9NPF7 189 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 DDX28Q9NUL7 540 aaKnown RBP11.86□□□□□ -0.51
CCNA1-201ENST00000255465 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 KCTD5Q9NXV2 234 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 ACTR3BQ9P1U1 418 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 SHOC2Q9UQ13 582 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 RANBP2P49792 3224 aaKnown RBP11.86□□□□□ -0.51
CCNA1-201ENST00000255465 MICAL3Q7RTP6 2002 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 LINC00862A6NCI5 91 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 DNALI1O14645 258 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 ZBTB39O15060 712 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 UGT2B11O75310 529 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SNAPINO95295 136 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 LYPLA2O95372 231 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 CTSHP09668 335 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PCSK2P16519 638 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RRM1P23921 792 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RFC2P35250 354 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 NPY2RP49146 381 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 VBP1P61758 197 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 GPC5P78333 572 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RELQ04864 619 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 UBAP2LQ14157 1087 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 MBTPS1Q14703 1052 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 NFIL3Q16649 462 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 HIST2H2ACQ16777 129 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PLA2G4FQ68DD2 849 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 ARSKQ6UWY0 536 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 DEFB128Q7Z7B8 93 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 LRRTM3Q86VH5 581 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SCML4Q8N228 414 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SVOPQ8N4V2 548 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 CCNYL1Q8N7R7 359 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 DTX3Q8N9I9 347 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RHOXF1Q8NHV9 184 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 HEXIM2Q96MH2 286 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SORT1Q99523 831 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RAB34Q9BZG1 259 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PITHD1Q9GZP4 211 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PPA2Q9H2U2 334 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 C8orf33Q9H7E9 229 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 TUFT1Q9NNX1 390 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 NGRNQ9NPE2 291 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 DUS2Q9NX74 493 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 FAM8A1Q9UBU6 413 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 TRAV6A0A075B6T7 132 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PDZK1P1A8MUH7 402 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 FOXN3O00409 490 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 BTN3A1O00481 513 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 CTDSP2O14595 271 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 MED24O75448 989 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 CHRNA1P02708 482 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RPLP2P05387 115 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 BMP2P12643 396 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 COX4I1P13073 169 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 NPR3P17342 541 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 TNFAIP3P21580 790 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 COMTP21964 271 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 ME2P23368 584 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 GRIA3P42263 894 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SERPINH1P50454 418 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 HK2P52789 917 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 DEFA1P59665 94 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 DEFA3P59666 94 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RACK1P63244 317 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 BST1Q10588 318 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 MFSD13AQ14CX5 517 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SHHQ15465 462 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms