RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 HIST2H2ACQ16777 129 aaPredicted RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 ZNF484Q5JVG2 852 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 PRR23CQ6ZRP0 262 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 PIWIL3Q7Z3Z3 882 aaKnown RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 FUNDC1Q8IVP5 155 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 CAPSLQ8WWF8 208 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 KLRG1Q96E93 195 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 ELMO2Q96JJ3 720 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 SLC38A10Q9HBR0 1119 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 NAALAD2Q9Y3Q0 740 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 UGT2A1Q9Y4X1 527 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 H0Y858 1186 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 DYRK3O43781 588 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 FOSL1P15407 271 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 ALDH3A2P51648 485 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 PPP5CP53041 499 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 SELPLGQ14242 412 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 PITRM1Q5JRX3 1037 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 TTC23Q5W5X9 447 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 LARP4Q71RC2 724 aaKnown RBP eCLIP20.47■□□□□ 0.87
RARA-201ENST00000254066 R3HCC1LQ7Z5L2 792 aaKnown RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 RETREG3Q86VR2 466 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 GALNT13Q8IUC8 556 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 C8orf59Q8N0T1 100 aaPredicted RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 ERLEC1Q96DZ1 483 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 AURKBQ96GD4 344 aaPredicted RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 CYP2S1Q96SQ9 504 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 POMKQ9H5K3 350 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 TLR9Q9NR96 1032 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.47■□□□□ 0.87
RARA-201ENST00000254066 KLQ9UEF7 1012 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 MAFBQ9Y5Q3 323 aaPredicted RBP20.47■□□□□ 0.87
RARA-201ENST00000254066 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 TLL2Q9Y6L7 1015 aa20.47■□□□□ 0.87
RARA-201ENST00000254066 TTC34A8MYJ7 566 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 TCP10L2B9ZVM9 353 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 VWA5AO00534 786 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 HPRP00739 348 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 GSNP06396 782 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 NR3C2P08235 984 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 KRT6CP48668 564 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 RAB10P61026 200 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 CTAG1AP78358 180 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 LRIT3Q3SXY7 679 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 OR7A2PQ8NGA2 310 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 OSBPL2Q9H1P3 480 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.46■□□□□ 0.87
RARA-201ENST00000254066 SIX4Q9UIU6 781 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 A0A087X1B8 175 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 NOTOA8MTQ0 251 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 PFKMP08237 780 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 KRT19P08727 400 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 BMP4P12644 408 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 ABCG1P45844 678 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 TXNDC5Q8NBS9 432 aaKnown RBP20.46■□□□□ 0.87
RARA-201ENST00000254066 TRIM54Q9BYV2 358 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 TP63Q9H3D4 680 aaPredicted RBP20.46■□□□□ 0.87
RARA-201ENST00000254066 GMPR2Q9P2T1 348 aaKnown RBP20.46■□□□□ 0.87
RARA-201ENST00000254066 EGFL7Q9UHF1 273 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 ZNF229Q9UJW7 825 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 TSPAN16Q9UKR8 245 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 SNX5Q9Y5X3 404 aa20.46■□□□□ 0.87
RARA-201ENST00000254066 B4GAT1O43505 415 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 BMP1P13497 986 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 BDNFP23560 247 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 SHMT2P34897 504 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 BMPR1AP36894 532 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 INCA1Q0VD86 236 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 POLD3Q15054 466 aaPredicted RBP20.45■□□□□ 0.86
RARA-201ENST00000254066 CRY1Q16526 586 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 PIGZQ86VD9 579 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 CPXCR1Q8N123 301 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 DNAAF3Q8N9W5 541 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 TRMOQ9BU70 441 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 OR2B2Q9GZK3 357 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 CMTM6Q9NX76 183 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 PCDHGB1Q9Y5G3 927 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 PCDHGA11Q9Y5H2 935 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 M0R3G1 203 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 RFPL2O75678 378 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 SCNN1AP37088 669 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 GTF2A2P52657 109 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 SUZ12Q15022 739 aaKnown RBP20.45■□□□□ 0.86
RARA-201ENST00000254066 PPP1R3AQ16821 1122 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 PID1Q7Z2X4 250 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 CUZD1Q86UP6 607 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 TSPEARQ8WU66 669 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 NXNL1Q96CM4 212 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 CEP44Q9C0F1 390 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 PDE10AQ9Y233 779 aa20.45■□□□□ 0.86
RARA-201ENST00000254066 MN1Q10571 1320 aaPredicted RBP20.44■□□□□ 0.86
RARA-201ENST00000254066 AURKAO14965 403 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 SCO2O43819 266 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 MFSD11O43934 449 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 THRBP10828 461 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 STMN1P16949 149 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 CYP3A5P20815 502 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 SLC6A2P23975 617 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 TKTL1P51854 596 aa20.44■□□□□ 0.86
RARA-201ENST00000254066 ARSFP54793 590 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms