RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CCDC162PA2VCL2 907 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 H3BMM5 538 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 HAS3O00219 553 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 SERPINF2P08697 491 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 EEF1B2P24534 225 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 EEF1DP29692 281 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 KCNC1P48547 511 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 HSPA13P48723 471 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 TMED1Q13445 227 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 KIAA0408Q6ZU52 694 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 BNIPLQ7Z465 357 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 LCA5Q86VQ0 697 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 MON1AQ86VX9 555 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 FAM47BQ8NA70 645 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 TSPAN14Q8NG11 270 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 PTCD2Q8WV60 388 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 TWIST2Q8WVJ9 160 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 VPS33AQ96AX1 596 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 ASB9Q96DX5 294 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 POLR1EQ9GZS1 481 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 OSER1Q9NX31 292 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 RIMS3Q9UJD0 308 aa12.62□□□□□ -0.39
RAB3IP-201ENST00000247833 CBX4O00257 560 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 AZIN1O14977 448 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 PFDN1O60925 122 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 USP46P62068 366 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 TAF10Q12962 218 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 MFSD14CQ5VZR4 134 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 LIMS2Q7Z4I7 341 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 ZBTB46Q86UZ6 589 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 CLYBLQ8N0X4 340 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 MIER2Q8N344 545 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 LPCAT1Q8NF37 534 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 OR7D4Q8NG98 312 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 PCDHGA7Q9Y5G6 932 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 BNIP3LO60238 219 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 ADSLP30566 484 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 PBX3P40426 434 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 TWF1Q12792 350 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 INPP5AQ14642 412 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 HERC3Q15034 1050 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 FAM45BPQ6NSW5 357 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 TTC33Q6PID6 262 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 FAM45AQ8TCE6 357 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 IGSF8Q969P0 613 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 RMND5BQ96G75 393 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 C3orf30Q96M34 536 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 ZNF512Q96ME7 567 aaPredicted RBP12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 HAUS8Q9BT25 410 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 LIN28AQ9H9Z2 209 aaKnown RBP12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 TREX1Q9NSU2 369 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 ASGR1P07306 291 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 NCK1P16333 377 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 ITGB6P18564 788 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 PSMA4P25789 261 aaKnown RBP12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 RPL10P27635 214 aaKnown RBP12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 KCNK10P57789 538 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 CYP51A1Q16850 503 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 MS4A13Q5J8X5 152 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 MIPOL1Q8TD10 442 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 SH3RF2Q8TEC5 729 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 SMIM14Q96QK8 99 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 DCUN1D5Q9BTE7 237 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 CSNK1G1Q9HCP0 422 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 NDUFA13Q9P0J0 144 aa12.61□□□□□ -0.39
RAB3IP-201ENST00000247833 A0A0U1RQS6 177 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CASQ2O14958 399 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 PABPC4LP0CB38 370 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 MAPK10P53779 464 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 FOXA1P55317 472 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 ESRRGP62508 458 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 PFKPQ01813 784 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 GRB7Q14451 532 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 TSNQ15631 228 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 PTPRNQ16849 979 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 OTUD3Q5T2D3 398 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CPSF7Q8N684 471 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 PDZD8Q8NEN9 1154 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 OR4K2Q8NGD2 314 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 OR4L1Q8NH43 312 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 PTERQ96BW5 349 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 VPS50Q96JG6 964 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CINPQ9BW66 212 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 FBXO44Q9H4M3 255 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 FAF1Q9UNN5 650 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 PCDHB5Q9Y5E4 795 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 H3BSA7 217 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 KATNA1O75449 491 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 GMNNO75496 209 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CLIC3O95833 236 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 RHOQP17081 205 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 IMPDH1P20839 514 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 CA8P35219 290 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 NFE2Q16621 373 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 TMEM259Q4ZIN3 620 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 C6orf10Q5SRN2 563 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 FAM171BQ6P995 826 aa12.6□□□□□ -0.39
RAB3IP-201ENST00000247833 KLHDC10Q6PID8 442 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms