RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 KCTD19Q17RG1 926 aaPredicted RBP20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 ZDHHC20Q5W0Z9 365 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 CYP2U1Q7Z449 544 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 SLC41A1Q8IVJ1 513 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 NAT8LQ8N9F0 302 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 NUS1Q96E22 293 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 LOXL4Q96JB6 756 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 SMIM14Q96QK8 99 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 LRRC1Q9BTT6 524 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 IL22Q9GZX6 179 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 CDH19Q9H159 772 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 SPO11Q9Y5K1 396 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 SPAG17Q6Q759 2223 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 FANCMQ8IYD8 2048 aa20.19■□□□□ 0.82
RHBDD3-201ENST00000216085 TRPM6Q9BX84 2022 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 PRAMEF26H0Y7S4 382 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 SLC31A1O15431 190 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 PPFIA2O75334 1257 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 RECQL5O94762 991 aaPredicted RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 SEC31AO94979 1220 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 PAK4O96013 591 aaPredicted RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 HMGCLP35914 325 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 PTGER3P43115 390 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 MRPS25P82663 173 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 SEPT6Q14141 434 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 AGERQ15109 404 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 RABEPKQ7Z6M1 372 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 NOA1Q8NC60 698 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 MIR1-1HGQ9H1L0 117 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 DPH5Q9H2P9 285 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 WHRNQ9P202 907 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 EIF2B4Q9UI10 523 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 ANAPC5Q9UJX4 755 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 SMG5Q9UPR3 1016 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 SNX24Q9Y343 169 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 THADAQ6YHU6 1953 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 HEATR9A2RTY3 570 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 TMEM63AO94886 807 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 NPY2RP49146 381 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 PTSQ03393 145 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 POU6F1Q14863 301 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 LRRC14Q15048 493 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 ANKRD22Q5VYY1 191 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 TMC3Q7Z5M5 1100 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 NRSN1Q8IZ57 195 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 PPHLN1Q8NEY8 458 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 DNASE2BQ8WZ79 361 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 KLK6Q92876 244 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 DTD2Q96FN9 168 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 SERAC1Q96JX3 654 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 COQ10AQ96MF6 247 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 PIH1D1Q9NWS0 290 aaKnown RBP20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 COQ6Q9Y2Z9 468 aa20.18■□□□□ 0.82
RHBDD3-201ENST00000216085 ABCA7Q8IZY2 2146 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 TCRBV7S3A2A0A539 114 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 C10orf142B7Z368 130 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 GOLGA8MH3BSY2 632 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 STX7O15400 261 aaKnown RBP20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 TPH1P17752 444 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 LPOP22079 712 aaPredicted RBP20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 IVDP26440 423 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 HOXD12P35452 270 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 GRIA1P42261 906 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 RPL21P46778 160 aaKnown RBP20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 ITGA8P53708 1063 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 SESN2P58004 480 aaPredicted RBP20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 TUBB4BP68371 445 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 CREB5Q02930 508 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 CAV1Q03135 178 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 PTPRRQ15256 657 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 CDKN3Q16667 212 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 ARMC3Q5W041 872 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 DUPD1Q68J44 220 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 LAIR1Q6GTX8 287 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 NLRP9Q7RTR0 991 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 HSD11B1LQ7Z5J1 315 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 FAM174AQ8TBP5 190 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 SERPINB12Q96P63 405 aa20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 LENG8Q96PV6 779 aaPredicted RBP20.17■□□□□ 0.82
RHBDD3-201ENST00000216085 PRR5-ARHGAP8B1AHC4 643 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 FPGTO14772 594 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 PYGLP06737 847 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 C1SP09871 688 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 ETV3P41162 512 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 NBL1P41271 181 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 STAT4Q14765 748 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 LPAL2Q16609 132 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 HIBCHQ6NVY1 386 aaPredicted RBP20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 SKA1Q96BD8 255 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 RANBP9Q96S59 729 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 C19orf43Q9BQ61 176 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 RRAGDQ9NQL2 400 aaPredicted RBP20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 AASDHPPTQ9NRN7 309 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 SAMD15Q9P1V8 674 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 ITPKAP23677 461 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 ADRA1DP25100 572 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 HADHAP40939 763 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 SPINT3P49223 89 aa20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 RACK1P63244 317 aaKnown RBP20.16■□□□□ 0.82
RHBDD3-201ENST00000216085 DNAJC21Q5F1R6 531 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms