RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Vmn2r90E9PXJ8 863 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Cdc6O89033 562 aaKnown RBP16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Rpl3P27659 403 aaKnown RBP16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Hdac2P70288 488 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Col6a2Q02788 1034 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Glt6d1Q2NKH9 311 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Zfp709Q8VC29 727 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Sntg1Q925E1 517 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Otub2Q9CQX0 234 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Suv39h1O54864 412 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Pde8aO88502 823 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 NkaplQ5SZT7 395 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 LbpQ61805 481 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Cdc14aQ6GQT0 603 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Plbd1Q8VCI0 550 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Kiaa1107Q80TK0 1369 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Irf8P23611 424 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 CremP27699 357 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Tbc1d17Q8BYH7 645 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Sav1Q8VEB2 386 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Gng13Q9JMF3 67 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Arhgef12Q8R4H2 1543 aaKnown RBP16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Kcnj13P86046 360 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Znf512Q69Z99 562 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Mxd3Q80US8 206 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Brat1Q8C3R1 822 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Q8CD60 292 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Coq6Q8R1S0 476 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Rnf169E9Q7F2 694 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 B3gnt4Q1RLK6 350 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Snap91Q61548 901 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Fgfr3Q61851 801 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Kiaa0895Q7TQE7 519 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Pcdh8Q7TSK3 1070 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Lpgat1Q91YX5 370 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Cep72Q9D3R3 646 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Slc5a3Q9JKZ2 718 aa16.61■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Zfp738B8JJX8 793 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Srp54bE9PXC0 504 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Vmn2r104E9Q2J5 860 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Dpysl3Q62188 570 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Gprc5bQ923Z0 410 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Cstf1Q99LC2 431 aaKnown RBP16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Mrpl15Q9CPR5 295 aaKnown RBP16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Riok2Q9CQS5 547 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Lrrc40Q9CRC8 602 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Slc39a1Q9QZ03 324 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Nfu1Q9QZ23 255 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 GakQ99KY4 1305 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 1700031M16RikA0A087WSH0 82 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Glipr1l3A0A1W2P7V2 236 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Cntn3Q07409 1028 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Mier2Q3U3N0 541 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Zyg11bQ3UFS0 744 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Mthfd1lQ3V3R1 977 aaKnown RBP16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Wee2Q66JT0 555 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Smarcd3Q6P9Z1 483 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Setdb2Q8C267 713 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Cts3Q91ZD5 332 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Izumo1Q9D9J7 397 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Mfsd2aQ9DA75 534 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Gm6509A0A0J9YUV1 481 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Zfp985A2A7A5 519 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Gm6351K9J7D1 481 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 FesP16879 822 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 UrodP70697 367 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Efcab3Q80X60 432 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Gprc5aQ8BHL4 356 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Akr1c18Q8K023 323 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Adgrf1Q8VEC3 908 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Mtfr2Q8VED8 361 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Itgb6Q9Z0T9 787 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 2610001J05RikF2Z3Y9 59 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Msx2Q03358 267 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Ak8Q32M07 479 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Papd7Q6PB75 542 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Atg4cQ811C2 458 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Gulp1Q8K2A1 304 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 OlahQ8R197 265 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Asb6Q91ZU1 418 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 EurlQ9D7G4 290 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Elf4Q9Z2U4 655 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Col1a2Q01149 1372 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Sirpb1aA0A0A6YYP6 397 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Zfand4D3Z3C6 739 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 FaahO08914 579 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 FkbplO35450 347 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Ifnar1P33896 590 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Dcst1Q059Y8 732 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 RubcnlQ3TD16 648 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Spata7Q80VP2 582 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Pacsin3Q99JB8 424 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Hnrnpa0Q9CX86 305 aaKnown RBP16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Smpd4Q6ZPR5 823 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Ap4e1Q80V94 1122 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Cadm2Q8BLQ9 435 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Syvn1Q9DBY1 612 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Tjp2Q9Z0U1 1167 aaKnown RBP16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Igsf9bE9PZ19 1328 aa16.6■□□□□ 0.25
Ubr3-202ENSMUST00000112251 Ptpn3A2ALK8 913 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms