RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Olfr1505Q7TQQ2 316 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Camk1dQ8BW96 385 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ccdc187Q8C5V8 958 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ubap2Q91VX2 1132 aaKnown RBP21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Osbpl1aQ91XL9 950 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 CtsmQ9JL96 333 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gria4Q9Z2W8 902 aa21.24■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm10718D3Z1I7 227 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Sgo2bJ3QMK1 1167 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm6408J3QNG1 320 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm3402K7N5P2 326 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 PbsnO08976 174 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cd151O35566 253 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Socs5O54928 536 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cdh1P09803 884 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Dnmt3cP0DOY1 709 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 VimP20152 466 aaKnown RBP21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Bcl6P41183 707 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Aldh3a1P47739 453 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Tnfrsf4P47741 272 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Sox1P53783 391 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gabrb3P63080 473 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Adra1dP97714 562 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Mettl17Q3U2U7 461 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Taar7aQ5QD12 358 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Smad2Q62432 467 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Atp2a3Q64518 1038 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Tmem164Q6PHN7 296 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Dsg1bQ7TSF1 1060 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Znf750Q8BH05 703 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Rspry1Q8BVR6 576 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 TbcdQ8BYA0 1196 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cabs1Q8C633 391 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Acsf2Q8VCW8 615 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Vsig1Q9D2J4 407 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Adam21Q9JI76 729 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Grm3Q9QYS2 879 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Coro1cQ9WUM4 474 aa21.23■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Il17dA0A0B4J1G4 205 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Tcte1A6H639 498 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ddx43D3Z6P9 646 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Vmn2r94E9PZK8 818 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Taf4E9QAP7 1042 aaKnown RBP21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Pde8aO88502 823 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Rasgrf2P70392 1189 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Trafd1Q3UDK1 580 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp560Q3URI6 754 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Stard3Q61542 446 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Nlrp9cQ66X01 1004 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Atg16l2Q6KAU8 623 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Paqr6Q6TCG5 343 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 B3galnt2Q8BG28 504 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 SgtaQ8BJU0 315 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fbxo9Q8BK06 437 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Prss50Q8BLH5 439 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cfap61Q8CEL2 1252 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Tram1l1Q8QZR0 363 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Sirt3Q8R104 334 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Vps39Q8R5L3 886 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 GcshQ91WK5 170 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Bcl7aQ9CXE2 210 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp773Q9CZ29 471 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zfp655Q9CZP3 541 aaKnown RBP21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Golga5Q9QYE6 729 aa21.22■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ttll9A2APC3 461 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cyp2j12G3UXT0 502 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm20828J3KMI7 228 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 5730507C01RikJ3QPX0 416 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gm3187M0QWW3 260 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Grk4O70291 574 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cxcr3O88410 367 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 H2-Eb1P04230 264 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Uba1yP31254 1058 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Rpl26P61255 145 aaKnown RBP21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Tmem184cQ3TPR7 525 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 LchnQ3UHG7 455 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Taar8aQ5QD07 344 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Olfr765Q7TRI6 309 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cep104Q80V31 926 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Suds3Q8BR65 328 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Slc43a1Q8BSM7 564 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gpr158Q8C419 1200 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Gpr153Q8K0Z9 631 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Slco3a1Q8R3L5 710 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Olfr767Q8VG33 309 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Glra3Q91XP5 464 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Dhrs7bQ99J47 323 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Wdr6Q99ME2 1125 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Lrrc40Q9CRC8 602 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Spc24Q9D083 201 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cab39lQ9DB16 337 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Sppl2cA2A6C4 690 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Vmn2r116E9Q6I0 856 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Olfr603L7N1Y4 312 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 ComtO88587 265 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 MutP16332 748 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cd19P25918 547 aa21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Fam207aP58468 219 aaKnown RBP21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Serpinb5P70124 375 aaKnown RBP21.21■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Pebp1P70296 187 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms