RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Rps27lQ6ZWY3 84 aaKnown RBP9.33□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Snx8Q8CFD4 459 aa9.33□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Tcaf2Q921K8 919 aa9.33□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Lyrm1Q9CQB7 122 aa9.33□□□□□ -0.92
Rnf43-201ENSMUST00000040089 PtsQ9R1Z7 144 aa9.33□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Znf518bB2RRE4 1077 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Mroh5E9PUJ8 762 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 C6E9Q6D8 931 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Pold2O35654 469 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Pou4f1P17208 421 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 PrkcgP63318 697 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Gdf3Q07104 366 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Nat9Q3UG98 241 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Srek1ip1Q4V9W2 153 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Nab1Q61122 486 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Creb3Q61817 404 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Rapgefl1Q68EF8 662 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Olfr297Q7TS07 310 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Dnajc16Q80TN4 772 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Dhx33Q80VY9 698 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Gm6377Q8BHV4 303 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Tbl3Q8C4J7 801 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Fnbp1lQ8K012 605 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Tmem161aQ8VCA6 480 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Plbd1Q8VCI0 550 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 PudpQ9D5U5 234 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Top3bQ9Z321 862 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 RttnQ8R4Y8 2226 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 SvilQ8K4L3 2170 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Gm13941A2AJ38 245 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Fam124aD3Z5V4 536 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Ifit3bE9PV48 403 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Cxcr3O88410 367 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Dnmt3aO88508 908 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Kcnn4O89109 425 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Icam1P13597 537 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 F9P16294 471 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Ckmt1P30275 418 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 PhexP70669 749 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Srbd1Q497V5 1015 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Itga3Q62470 1053 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Dalrd3Q6PJN8 538 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Mis18bp1Q80WQ8 998 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Pqlc1Q80XM9 271 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Strip2Q8C9H6 844 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Sh2d5Q8JZW5 429 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Mrpl47Q8K2Y7 252 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 MfrpQ8K480 584 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Fam151aQ8QZW3 608 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Ugt2b1Q8R084 529 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Ing3Q8VEK6 421 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Mospd1Q8VEL0 213 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Arpc2Q9CVB6 300 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Rad9aQ9Z0F6 389 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Bscl2Q9Z2E9 383 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 MycsQ9Z304 431 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Pramef20B1ARV6 477 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Tmem45a2B7ZWJ5 289 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Vmn2r11E9Q4X4 861 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 BC024978J3QPC3 361 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Usp2O88623 613 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Cd160O88875 185 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Scd1P13516 355 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Wnt3aP27467 352 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Abce1P61222 599 aaKnown RBP9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Adcyap1r1P70205 496 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Mpp1P70290 466 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Zfp560Q3URI6 754 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Cep295nlQ497N6 533 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Trim67Q505D9 768 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 MelkQ61846 643 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Enpp3Q6DYE8 874 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Gm5414Q6IFZ8 552 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Zmiz2Q8CIE2 920 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Vmn1r206Q8R277 312 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Pcolce2Q8R4W6 414 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Klrb1fQ8VD98 217 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Rsl24d1Q99L28 163 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Tpgs1Q99MS8 303 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Fcf1Q9CTH6 198 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Zcchc12Q9CZA5 402 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 CabyrQ9D424 453 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Clic3Q9D7P7 237 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Dtwd1Q9D8U7 304 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Nkx2-4Q9EQM3 354 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Il17rbQ9JIP3 499 aa9.32□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Malrd1A2AJX4 2123 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Lzts3A2AHG0 700 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Gm13101A2ASJ0 481 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Gbp4A4UUI3 631 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Bnc1O35914 961 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Aldh3a1P47739 453 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 PrkacbP68181 351 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 SiaeP70665 541 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 AxlQ00993 888 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Ptchd3Q0EEE2 906 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Ak8Q32M07 479 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Brms1lQ3U1T3 323 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Ntrk1Q3UFB7 799 aa9.31□□□□□ -0.92
Rnf43-201ENSMUST00000040089 Xkr4Q5GH67 647 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms