RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Aif1lQ9EQX4 150 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Coro1cQ9WUM4 474 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Chd3B1AR17 2055 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rdh7O88451 316 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Kcnj2P35561 428 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PnmtP40935 295 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tll1Q62381 1013 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Syn2Q64332 586 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gpd2Q64521 727 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Krt88Q9CPR6 171 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Snx10Q9CWT3 201 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 KelQ9EQF2 713 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Tcirg1Q9JHF5 834 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Adam28Q9JLN6 793 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Edf1Q9JMG1 148 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cyp4a32A2A8T1 509 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Olfr171G5E8J1 314 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ninj1O70131 152 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pgk1P09411 417 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ap2s1P62743 142 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ripk1Q60855 656 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pfkfb4Q6DTY7 469 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 D3Ertd751eQ8BGN2 192 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Caskin2Q8VHK1 1201 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gabra4Q9D6F4 552 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm6509A0A0J9YUV1 481 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm6351K9J7D1 481 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 AurkbO70126 345 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PomkQ3TUA9 349 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Q6PAC4 1279 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Efcab3Q80X60 432 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ubxn6Q99PL6 442 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pnpla7A2AJ88 1352 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Smim17A0A504 109 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Spp1P10923 294 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 TubP50586 505 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PitpnaP53810 271 aaKnown RBP13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Kcnd1Q03719 651 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Scube1Q6NZL8 1018 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 AslQ91YI0 464 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Uckl1Q91YL3 548 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Trappc5Q9CQA1 188 aa13.97□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm11397F6V5V4 377 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 GcatO88986 416 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Nemp1Q6ZQE4 437 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Serpinb9fQ80UK5 377 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gulp1Q8K2A1 304 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Serpinb9gQ8VHQ1 377 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Vmn2r51L7N215 852 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Cyp2c29Q64458 490 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Vmn1r24Q8R2D6 296 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gmcl1Q920G9 524 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rsph14Q9D3W1 341 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 PolkQ9QUG2 852 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm28048F7BCN0 99 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm20509G3UZF1 325 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ppp4cP97470 307 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 RubcnlQ3TD16 648 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ldoc1Q7TPY9 151 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Spdye4bQ8CDE8 236 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fam25cQ8CF02 89 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gpn1Q8VCE2 372 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Sapcd1Q9CY86 146 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Lsm12Q9D0R8 195 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mau2Q9D2X5 619 aaKnown RBP13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ilf3Q9Z1X4 898 aaKnown RBP13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Gm10134F6ZQC6 126 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Pmm1O35621 262 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 4933436I01RikQ9D3T1 429 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Usp12Q9D9M2 370 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Rpl38Q9JJI8 70 aaKnown RBP13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Grk1Q9WVL4 564 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Slit1Q80TR4 1531 aa13.96□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Kbtbd6E9PYD7 486 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm8220F6YKI2 213 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 AY358078Q6UY53 465 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Atxn2lQ7TQH0 1049 aaKnown RBP13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Pex16Q91XC9 336 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Pcdhgb5Q91XX5 926 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Spaca5A2AE20 160 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Icam1P13597 537 aaKnown RBP13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Npr1P18293 1057 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rnf113a2Q14B01 337 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Dnaaf3Q3UYV8 586 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Prdm4Q80V63 803 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fam76bQ80XP8 339 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Jazf1Q80ZQ5 243 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Tmem17Q8K0U3 198 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Golm1Q91XA2 393 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Atp6v1g1Q9CR51 118 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ap1s2Q9DB50 160 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ptdss2Q9Z1X2 473 aa13.96□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Vmn2r118E9Q1C1 853 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 KlO35082 1014 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Pdcd4Q61823 469 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Susd6Q8BGE4 302 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Arf2Q8BSL7 181 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rexo2Q9D8S4 237 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Carm1Q9WVG6 608 aa13.95□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm7682A0A0J9YUM1 481 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms