RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PIGNO95427 931 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 UGT2B4P06133 528 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF16P17020 682 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 HSPA13P48723 471 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 DNERQ8NFT8 737 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 TRPM4Q8TD43 1214 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 AUTS2Q8WXX7 1259 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 DPYSL5Q9BPU6 564 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 NRCAMQ92823 1304 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF879B4DU55 563 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 HNRNPLP14866 589 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 TLR1Q15399 786 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 NMUR1Q9HB89 426 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 PER2O15055 1255 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 GCATO75600 419 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 ELOAQ14241 798 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 VITQ6UXI7 678 aa17.88■□□□□ 0.45
CACNA1A-227ENST00000636549 A0A1W2PRG6 482 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 H3BNH8 94 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 EIF1AYO14602 144 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 CHRM5P08912 532 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 PTPRNQ16849 979 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF730Q6ZMV8 503 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 C12orf56Q8IXR9 622 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF615Q8N8J6 731 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 QRFPRQ96P65 431 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 PANX1Q96RD7 426 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 MED31Q9Y3C7 131 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 SSU72P8A0A1W2PR75 194 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 MAGEA13PA6NCF6 341 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 RSL1D1O76021 490 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 UGT1A5P35504 534 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ENPEPQ07075 957 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ZDHHC13Q8IUH4 622 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ZCCHC7Q8N3Z6 543 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 KCTD4Q8WVF5 259 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 HERVK_113Q902F9 699 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 GORASP1Q9BQQ3 440 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 CAPN6Q9Y6Q1 641 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 HGFP14210 728 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ICAM3P32942 547 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 TOR1AIP1Q5JTV8 583 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 MCOLN2Q8IZK6 566 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 GPC2Q8N158 579 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ZNF540Q8NDQ6 660 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 OR52J3Q8NH60 311 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ZYG11BQ9C0D3 744 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 GANQ9H2C0 597 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 WRBO00258 174 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 GOT1P17174 413 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 CDKL1Q00532 357 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 UBAP2LQ14157 1087 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 NAPRTQ6XQN6 538 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 SHC3Q92529 594 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 C18orf25Q96B23 403 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 COQ8BQ96D53 544 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 TBX5Q99593 518 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 CTPS2Q9NRF8 586 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 PCDHA3Q9Y5H8 950 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 MZT2AQ6P582 158 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 OAFQ86UD1 273 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ZZZ3Q8IYH5 903 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 MRPL45Q9BRJ2 306 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 PLA2G12BQ9BX93 195 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 RPH3AQ9Y2J0 694 aaPredicted RBP17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 PCDHGA6Q9Y5G7 932 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 LINGO3P0C6S8 592 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 SREBF1P36956 1147 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 C4orf46Q504U0 113 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 ATAT1Q5SQI0 421 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 MLIPQ5VWP3 458 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 PTCHD4Q6ZW05 846 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 MOCS1Q9NZB8 636 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 GSTK1Q9Y2Q3 226 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 TMX2Q9Y320 296 aa17.87■□□□□ 0.45
CACNA1A-227ENST00000636549 B4GALT5O43286 388 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 VLDLRP98155 873 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 XRRA1Q6P2D8 792 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 ABRAQ8N0Z2 381 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 SVOPQ8N4V2 548 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 RASGEF1AQ8N9B8 481 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 ZFP28Q8NHY6 868 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 DNAJC28Q9NX36 388 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 ABI3Q9P2A4 366 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 CPNE6O95741 557 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 SNRPFP62306 86 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 FAM187BQ17R55 369 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 RGMBQ6NW40 437 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 TTI2Q6NXR4 508 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 TNS4Q8IZW8 715 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 BOLLQ8N9W6 283 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 YIPF4Q9BSR8 244 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 GMPPBQ9Y5P6 360 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 SNX10Q9Y5X0 201 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 C9IYK1 514 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 OR1F1O43749 312 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 NRP2O60462 931 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 PROCP04070 461 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 GJA9P57773 515 aa17.86■□□□□ 0.45
CACNA1A-227ENST00000636549 DUPD1Q68J44 220 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms