RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 POU6F1Q14863 301 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 UBXN2BQ14CS0 331 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 TAF1AQ15573 450 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 UAP1Q16222 522 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 TJAP1Q5JTD0 557 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 TSTD2Q5T7W7 516 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 STEAP4Q687X5 459 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 UNC5AQ6ZN44 842 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 HDXQ7Z353 690 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 TMPRSS6Q8IU80 811 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 IQCKQ8N0W5 287 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 CBARPQ8N350 705 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PPHLN1Q8NEY8 458 aaKnown RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 MDGA1Q8NFP4 955 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 BLOC1S5Q8TDH9 187 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PEX13Q92968 403 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 RAB7BQ96AH8 199 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 CLDN23Q96B33 292 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 ARRDC3Q96B67 414 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 CFAP36Q96G28 342 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PPP1R16AQ96I34 528 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 FCRL3Q96P31 734 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 NECAB3Q96P71 396 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 MCCC1Q96RQ3 725 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 HDAC8Q9BY41 377 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 FUT8Q9BYC5 575 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 EPB41L4BQ9H329 900 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 TBC1D17Q9HA65 648 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 PLAC1Q9HBJ0 212 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 MOCS1Q9NZB8 636 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 SAMD15Q9P1V8 674 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 KCTD3Q9Y597 815 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.05□□□□□ -1.12
CPNE3-209ENST00000620393 RPS6KL1Q9Y6S9 549 aa8.05□□□□□ -1.12
CPNE3-209ENST00000620393 ZCWPW2A0A1B0GU75 182 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CAPN8A6NHC0 703 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 UPK3BL1B0FP48 263 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 UPK3BL2E5RIL1 263 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ACSL3O95573 720 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ADH1BP00325 375 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PRKCGP05129 697 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ABHD2P08910 425 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ALPIP09923 528 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CYP2A6P11509 494 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 LPOP22079 712 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 XPAP23025 273 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 NMBRP28336 390 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PHBP35232 272 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 HMGCLP35914 325 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PSMD8P48556 350 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 METAP1P53582 386 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 FAM193AP78312 1265 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PDE1BQ01064 536 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PTSQ03393 145 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ZBTB16Q05516 673 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 SEPT6Q14141 434 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 FRG1Q14331 258 aaKnown RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 GAS6Q14393 721 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CASP8Q14790 479 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PTPRRQ15256 657 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CST6Q15828 149 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CNGA3Q16281 694 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CRY1Q16526 586 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 SKIDA1Q1XH10 827 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 POM121L1PQ3SYA9 428 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 SPANXN3Q5MJ09 141 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ALS2CLQ60I27 953 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ZNF776Q68DI1 518 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ESRP1Q6NXG1 681 aaKnown RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ZNF449Q6P9G9 518 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 FBXL19Q6PCT2 694 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CRTC1Q6UUV9 634 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 CES3Q6UWW8 571 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 Q6ZS52 159 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 USP45Q70EL2 814 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ERN2Q76MJ5 926 aaKnown RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PARS2Q7L3T8 475 aaKnown RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 SYT13Q7L8C5 426 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 TTC30BQ8N4P2 665 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 HDDC3Q8N4P3 179 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 STYXQ8WUJ0 223 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 UBLCP1Q8WVY7 318 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 EDAQ92838 391 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 EID2BQ96D98 161 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 MFSD3Q96ES6 412 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 SIPA1Q96FS4 1042 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ZNF778Q96MU6 729 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 C19orf43Q9BQ61 176 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 TRIM56Q9BRZ2 755 aaKnown RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 GPR63Q9BZJ6 419 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 MKRN2Q9H000 416 aaKnown RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 VPS37BQ9H9H4 285 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 ZFYVE1Q9HBF4 777 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 PCDH12Q9NPG4 1184 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 NPDC1Q9NQX5 325 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-209ENST00000620393 DYRK4Q9NR20 520 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 TREX1Q9NSU2 369 aa8.04□□□□□ -1.12
CPNE3-209ENST00000620393 B4GALT6Q9UBX8 382 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms