RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ALDH3A1P30838 453 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 IL12RB1P42701 662 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 LMAN2Q12907 356 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 CRYMQ14894 314 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 SPANXN3Q5MJ09 141 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 SERPINA13PQ6UXR4 307 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 ADIPOR2Q86V24 386 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 RASSF3Q86WH2 238 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.69■■□□□ 1.06
SGMS1-210ENST00000619438 ACMSDQ8TDX5 336 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 CYB5D2Q8WUJ1 264 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 C10orf82Q8WW14 230 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 GORASP1Q9BQQ3 440 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 NEU3Q9UQ49 428 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 EML5Q05BV3 1969 aa21.69■■□□□ 1.06
SGMS1-210ENST00000619438 GVINP1Q7Z2Y8 2422 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 A0A1W2PQF6 199 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 UGT1A9O60656 530 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 DCTN3O75935 186 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 TGDSO95455 350 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 CRHR1P34998 444 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 NRG1Q02297 640 aaPredicted RBP21.68■■□□□ 1.06
SGMS1-210ENST00000619438 FNDC3BQ53EP0 1204 aaKnown RBP21.68■■□□□ 1.06
SGMS1-210ENST00000619438 TEX44Q53QW1 395 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 FSCBQ5H9T9 825 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 KIAA0907Q7Z7F0 614 aaPredicted RBP21.68■■□□□ 1.06
SGMS1-210ENST00000619438 CIR1Q86X95 450 aaPredicted RBP21.68■■□□□ 1.06
SGMS1-210ENST00000619438 TRIM42Q8IWZ5 723 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 LZTR1Q8N653 840 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 NETO2Q8NC67 525 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 FAM111AQ96PZ2 611 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 TRIM56Q9BRZ2 755 aaKnown RBP21.68■■□□□ 1.06
SGMS1-210ENST00000619438 CEP41Q9BYV8 373 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 IQCGQ9H095 443 aaKnown RBP21.68■■□□□ 1.06
SGMS1-210ENST00000619438 UGT1A7Q9HAW7 530 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 UGT1A10Q9HAW8 530 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 UGT1A8Q9HAW9 530 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 CASS4Q9NQ75 786 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 GMEB2Q9UKD1 530 aa21.68■■□□□ 1.06
SGMS1-210ENST00000619438 OTOGLQ3ZCN5 2332 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 AP3B1O00203 1094 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 FGF10O15520 208 aaPredicted RBP21.67■■□□□ 1.06
SGMS1-210ENST00000619438 POLBP06746 335 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 TROVE2P10155 538 aaKnown RBP eCLIP21.67■■□□□ 1.06
SGMS1-210ENST00000619438 SERPINB4P48594 390 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 SESN2P58004 480 aaPredicted RBP21.67■■□□□ 1.06
SGMS1-210ENST00000619438 DBN1Q16643 649 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 ACBD5Q5T8D3 534 aaPredicted RBP21.67■■□□□ 1.06
SGMS1-210ENST00000619438 MANEALQ5VSG8 457 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 KIAA1211LQ6NV74 962 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 CASC4Q6P4E1 433 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 IGSF8Q969P0 613 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 TEKT5Q96M29 485 aa21.67■■□□□ 1.06
SGMS1-210ENST00000619438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.66■■□□□ 1.06
SGMS1-210ENST00000619438 A0A1B0GVM2 712 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 TCAF2A6NFQ2 919 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 PSMD3O43242 534 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 EPHX1P07099 455 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 DLDP09622 509 aaKnown RBP21.66■■□□□ 1.06
SGMS1-210ENST00000619438 CD68P34810 354 aaPredicted RBP21.66■■□□□ 1.06
SGMS1-210ENST00000619438 NCALDP61601 193 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 ST8SIA6P61647 398 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 ZNF177Q13360 481 aaPredicted RBP21.66■■□□□ 1.06
SGMS1-210ENST00000619438 SETDB1Q15047 1291 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 C14orf80Q86SX3 495 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 RAB3IL1Q8TBN0 382 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 C1orf74Q96LT6 269 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 LRRC40Q9H9A6 602 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 SYBUQ9NX95 663 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 SNX10Q9Y5X0 201 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 GPR179Q6PRD1 2367 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 MAGEB16A2A368 324 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 CCNB1P14635 433 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 CCNCP24863 283 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 NPY2RP49146 381 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 OXCT1P55809 520 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 LAIR1Q6GTX8 287 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 CDHR3Q6ZTQ4 885 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 RLN3Q8WXF3 142 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 PTPRN2Q92932 1015 aa21.66■■□□□ 1.06
SGMS1-210ENST00000619438 C12orf65Q9H3J6 166 aaKnown RBP21.66■■□□□ 1.06
SGMS1-210ENST00000619438 MAP3K13O43283 966 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 CLDN11O75508 207 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 ATP5HO75947 161 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 GABRG2P18507 467 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 HNRNPH1P31943 449 aaKnown RBP21.65■■□□□ 1.06
SGMS1-210ENST00000619438 CSKP41240 450 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 ZBTB17Q13105 803 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 SLC12A1Q13621 1099 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 FUT11Q495W5 492 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 ARTNQ5T4W7 220 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 PACS1Q6VY07 963 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 TMEM135Q86UB9 458 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 KBTBD6Q86V97 674 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 DCLK2Q8N568 766 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 FAM160A2Q8N612 972 aaPredicted RBP21.65■■□□□ 1.06
SGMS1-210ENST00000619438 SPACA7Q96KW9 195 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 TSSK1BQ9BXA7 367 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 CATSPERBQ9H7T0 1116 aa21.65■■□□□ 1.06
SGMS1-210ENST00000619438 BFARQ9NZS9 450 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms