RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 NFKBIL1Q9UBC1 381 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PACSIN3Q9UKS6 424 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 DERAQ9Y315 318 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SLC9A3R1O14745 358 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 TEX28O15482 410 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 CAPN15O75808 1086 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ANGPTL1O95841 491 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ARP10275 920 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 RBL1P28749 1068 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MAZP56270 477 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 AP3S2P59780 193 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 RHOAP61586 193 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 POLR2LP62875 67 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 FKBP1BP68106 108 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 BNIP3Q12983 259 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PLEKHG6Q3KR16 790 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PABPC1LQ4VXU2 614 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 POLNQ7Z5Q5 900 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ANKRD23Q86SG2 305 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PHC2Q8IXK0 858 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 CDYL2Q8N8U2 506 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 REPS2Q8NFH8 660 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 NKX2-3Q8TAU0 364 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 TRUB1Q8WWH5 349 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 LPGAT1Q92604 370 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ROPN1LQ96C74 230 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 DIRAS2Q96HU8 199 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 TPD52L3Q96J77 140 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ZNF668Q96K58 619 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 QRFPRQ96P65 431 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 POP1Q99575 1024 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 TRMOQ9BU70 441 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 COQ10BQ9H8M1 238 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 CHMP1AQ9HD42 196 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 VPS51Q9UID3 782 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 OGDHLQ9ULD0 1010 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 A0A088AWK7 358 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 METTL21EPA6NDL7 271 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MGAT4DA6NG13 374 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 IFRD1O00458 451 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 GRAP2O75791 330 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SERPIND1P05546 499 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 NR2F6P10588 404 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ZNF7P17097 686 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MAGP20916 626 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ZNF10P21506 573 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 S100A3P33764 101 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 RPL22P35268 128 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 CAPZA2P47755 286 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 AP1S2P56377 157 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SMIM11AP58511 58 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MVKQ03426 396 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SMARCB1Q12824 385 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MFSD10Q14728 455 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PLCL1Q15111 1095 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PGBD2Q6P3X8 592 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 RIOX2Q8IUF8 465 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MCOLN3Q8TDD5 553 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 C12orf43Q96C57 262 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PHF21BQ96EK2 531 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PRMT6Q96LA8 375 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MRPL57Q9BQC6 102 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SEZ6LQ9BYH1 1024 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 STARD7Q9NQZ5 370 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 CATSPERZQ9NTU4 200 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MTRRQ9UBK8 725 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 RPS6KB2Q9UBS0 482 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 AASSQ9UDR5 926 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 COL5A2P05997 1499 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 OR6C70A6NIJ9 312 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ZSCAN5BA6NJL1 495 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 EML1O00423 815 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PRMT5O14744 637 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 IGSF6O95976 241 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 C8BP07358 591 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 OR56A5P0C7T3 313 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PSMA1P25786 263 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PPP2R1BP30154 601 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 FSTL1Q12841 308 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MAB21L1Q13394 359 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SKIV2LQ15477 1246 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ZNF517Q6ZMY9 492 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 FAM92BQ6ZTR7 304 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ADGRG6Q86SQ4 1221 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 LNX1Q8TBB1 728 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 TUBA1CQ9BQE3 449 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SLC7A8Q9UHI5 535 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 ZNF510Q9Y2H8 683 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 DISP2A7MBM2 1401 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 BOLA2-SMG1P6H3BVE0 249 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 IRF6O14896 467 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 PAPSS1O43252 624 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 KHDRBS3O75525 346 aaKnown RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 CKBP12277 381 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SLC7A1P30825 629 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MAPK9P45984 424 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 NAGLUP54802 743 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 TMBIM6P55061 237 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MPP1Q00013 466 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms