RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SORCS1Q8WY21 1168 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 SUSD3Q96L08 255 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 TMLHEQ9NVH6 421 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 AAR2Q9Y312 384 aaKnown RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 MFHAS1Q9Y4C4 1052 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 HEATR9A2RTY3 570 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 IQCF5A8MTL0 148 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 KRT75O95678 551 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 IGSF6O95976 241 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 OGDHQ02218 1023 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 DSC2Q02487 901 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 OR14C36Q8NHC7 312 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 ADGRE3Q9BY15 652 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 POLR1EQ9GZS1 481 aaKnown RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 IL1RL2Q9HB29 575 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 KLHL3Q9UH77 587 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 CHEK2O96017 543 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 TACR2P21452 398 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 CLCN2P51788 898 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 DPYSL3Q14195 570 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 TIGD7Q6NT04 549 aaPredicted RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 CRTC3Q6UUV7 619 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 SNX31Q8N9S9 440 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 TMEM79Q9BSE2 394 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 LRRC19Q9H756 370 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 HECAQ9UBI9 543 aaPredicted RBP10.89□□□□□ -0.67
FAM3A-221ENST00000612856 CASP8AP2Q9UKL3 1982 aa10.89□□□□□ -0.67
FAM3A-221ENST00000612856 SYN3O14994 580 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 IL1R2P27930 398 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SPRP35270 261 aaPredicted RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 FDFT1P37268 417 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 ACTR3P61158 418 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 FAM151BQ6UXP7 276 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 GPR141Q7Z602 305 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SLC7A5P1Q8MH63 180 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 TSPAN14Q8NG11 270 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 OLIG1Q8TAK6 271 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 FOPNLQ96NB1 174 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SRPK1Q96SB4 655 aaKnown RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SERPINI1Q99574 410 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 GPAMQ9HCL2 828 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 IL23AQ9NPF7 189 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 RSL24D1Q9UHA3 163 aaKnown RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 TRMT6Q9UJA5 497 aaKnown RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 ZNF229Q9UJW7 825 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 C2orf78A6NCI8 922 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 ZBTB42B2RXF5 422 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 E9PAM4 449 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 J3QRK9 145 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 PARNO95453 639 aaKnown RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 CDK4P11802 303 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 ITGALP20701 1170 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 HALP42357 657 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 PTK6Q13882 451 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 MAPK11Q15759 364 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 UPP1Q16831 310 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SNAP47Q5SQN1 464 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 RAET1GQ6H3X3 334 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 MRNIPQ6NTE8 343 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 PPP4R4Q6NUP7 873 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 HMGB4Q8WW32 186 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 FBXL8Q96CD0 374 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 KCTD15Q96SI1 283 aaPredicted RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 ASB8Q9H765 288 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 WBP1LQ9NX94 342 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 WDR37Q9Y2I8 494 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SNX13Q9Y5W8 968 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 IGKV6D-21A0A0A0MT36 114 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 NOMO1Q15155 1222 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SETMARQ53H47 684 aaPredicted RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 LDLRAP1Q5SW96 308 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 CNSTQ6PJW8 725 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 SYDE1Q6ZW31 735 aaPredicted RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 DCBLD1Q8N8Z6 715 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 MED8Q96G25 268 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 EBF4Q9BQW3 602 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 CNTN3Q9P232 1028 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 EPS15L1Q9UBC2 864 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 AGO1Q9UL18 857 aaKnown RBP10.88□□□□□ -0.67
FAM3A-221ENST00000612856 DERAQ9Y315 318 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 ACTL7BQ9Y614 415 aa10.88□□□□□ -0.67
FAM3A-221ENST00000612856 LYPLA1O75608 230 aaPredicted RBP10.87□□□□□ -0.67
FAM3A-221ENST00000612856 FAM155BO75949 473 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 CNTN5O94779 1100 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 GLP2RO95838 553 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 TIMP1P01033 207 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 ZNF24P17028 368 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 SERPINA4P29622 427 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 HMOX2P30519 316 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 HOXD12P35452 270 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 RXRGP48443 463 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 PSMD8P48556 350 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 KPNA2P52292 529 aaKnown RBP10.87□□□□□ -0.67
FAM3A-221ENST00000612856 CDH15P55291 814 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 WNT3AP56704 352 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 PLOD1Q02809 727 aaPredicted RBP10.87□□□□□ -0.67
FAM3A-221ENST00000612856 ITGA9Q13797 1035 aa10.87□□□□□ -0.67
FAM3A-221ENST00000612856 MYLK3Q32MK0 819 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms