RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PLEKHG4Q58EX7 1191 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 PDSS2Q86YH6 399 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 FAM9CQ8IZT9 166 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 PCSK9Q8NBP7 692 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 VPS45Q9NRW7 570 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 OPTCQ9UBM4 332 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 STX16-NPEPL1H3BU86 382 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 ALDOAP04075 364 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 FGF1P05230 155 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 EDN1P05305 212 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 TIGD2Q4W5G0 525 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 TNFAIP8L3Q5GJ75 292 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 CROCCP3Q8IVE0 287 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 FAM81AQ8TBF8 368 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC27A5Q9Y2P5 690 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC22A2O15244 555 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 CHRNA4P43681 627 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 MTA1Q13330 715 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 PITRM1Q5JRX3 1037 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 TLDC1Q6P9B6 456 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 PLD6Q8N2A8 252 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 NTAN1Q96AB6 310 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC39A8Q9C0K1 460 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 PCDHAC1Q9H158 963 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 RIBC2Q9H4K1 309 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 LMCD1Q9NZU5 365 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 KLQ9UEF7 1012 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 TNPO3Q9Y5L0 923 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 GLI3P10071 1580 aa17.16■□□□□ 0.34
SMARCA4-215ENST00000590574 A8MX80 341 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 TMEM233B4DJY2 109 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC22A3O75751 556 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 NEK2P51955 445 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 KCTD21Q4G0X4 260 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 FBXO48Q5FWF7 155 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 COQ10BQ9H8M1 238 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 EXOSC4Q9NPD3 245 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 TMEM161AQ9NX61 479 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 NHSL1Q5SYE7 1610 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 NPEPPSL1A6NEC2 478 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 CNTN3Q9P232 1028 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 SPASTQ9UBP0 616 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 FFAR3O14843 346 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 GPR42O15529 346 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 ALDH1A1P00352 501 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 TTKP33981 857 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 ATP6V0D1P61421 351 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 BFSP2Q13515 415 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 DDX53Q86TM3 631 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 MON1AQ86VX9 555 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 ARFGAP1Q8N6T3 406 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 UTP4Q969X6 686 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 TBATAQ96M53 351 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 MOSPD1Q9UJG1 213 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 BTBD19C9JJ37 291 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 OCM2P0CE71 109 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 OCMP0CE72 109 aaPredicted RBP17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 HLA-DPA1P20036 260 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 IFNA8P32881 189 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 PRIM2P49643 509 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 GRIK3Q13003 919 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 TSTD2Q5T7W7 516 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 DDX28Q9NUL7 540 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 DAPK2Q9UIK4 370 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 TIMM22Q9Y584 194 aa17.15■□□□□ 0.34
SMARCA4-215ENST00000590574 TTPAP49638 278 aa17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 KIAA0408Q6ZU52 694 aa17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 SOCS4Q8WXH5 440 aa17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 LINGO1Q96FE5 620 aa17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 SLC25A51Q9H1U9 297 aa17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 VRTNQ9H8Y1 702 aa17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 IMPAD1Q9NX62 359 aa17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 COPG1Q9Y678 874 aaKnown RBP17.14■□□□□ 0.34
SMARCA4-215ENST00000590574 FAM20BO75063 409 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 STAU1O95793 577 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 PAFAH1B3Q15102 231 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 STK40Q8N2I9 435 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 IGKV6D-21A0A0A0MT36 114 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 RPP40O75818 363 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 STBD1O95210 358 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 PRKG2Q13237 762 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 FAM126AQ9BYI3 521 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 TXNDC11Q6PKC3 985 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 ZC3HC1Q86WB0 502 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 TMEM132CQ8N3T6 1108 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 HMCESQ96FZ2 354 aa17.14■□□□□ 0.33
SMARCA4-215ENST00000590574 SF3B1O75533 1304 aaKnown RBP eCLIP17.14■□□□□ 0.334e-6■■■■■ 127.4
SMARCA4-215ENST00000590574 CCDC189A1A4V9 331 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ADCY6O43306 1168 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 TRMUO75648 421 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ATP5C1P36542 298 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 CCR10P46092 362 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 RPL38P63173 70 aaKnown RBP17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 ZBTB46Q86UZ6 589 aa17.13■□□□□ 0.33
SMARCA4-215ENST00000590574 CFAP52Q8N1V2 620 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms