RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 RXFP3Q9NSD7 469 aa21.37■■□□□ 1.01
ATG4D-212ENST00000590096 ZNF148Q9UQR1 794 aa21.37■■□□□ 1.01
ATG4D-212ENST00000590096 LRRK1Q38SD2 2015 aa21.37■■□□□ 1.01
ATG4D-212ENST00000590096 DMXL1Q9Y485 3027 aa21.37■■□□□ 1.01
ATG4D-212ENST00000590096 C5orf60A6NFR6 353 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 CAPN8A6NHC0 703 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 A6NNZ2 444 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 ANKRD66B4E2M5 251 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 TLR4O00206 839 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 RAD51BO15315 384 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 ANXA9O76027 345 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 HEXIM1O94992 359 aaKnown RBP21.36■■□□□ 1.01
ATG4D-212ENST00000590096 STIP1P31948 543 aaKnown RBP21.36■■□□□ 1.01
ATG4D-212ENST00000590096 GEMP55040 296 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 CLDN2P57739 230 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 SNX1Q13596 522 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 ACOX1Q15067 660 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 CNGA3Q16281 694 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 KIF19Q2TAC6 998 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 DENND2CQ68D51 928 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 GCNT7Q6ZNI0 430 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 PTAR1Q7Z6K3 402 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-212ENST00000590096 NETO1Q8TDF5 533 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 TRIB3Q96RU7 358 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 OSBPL9Q96SU4 736 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 NAP1L3Q99457 506 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-212ENST00000590096 KLF6Q99612 283 aaPredicted RBP21.36■■□□□ 1.01
ATG4D-212ENST00000590096 CEP250Q9BV73 2442 aa21.36■■□□□ 1.01
ATG4D-212ENST00000590096 H0Y8X5 98 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 PSMD11O00231 422 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 NDST3O95803 873 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 CER1O95813 267 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 THEGLP0DJG4 465 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 ZNF30P17039 623 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 PSMB4P28070 264 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 WNT3AP56704 352 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 LRRC14Q15048 493 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 SIX1Q15475 284 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-212ENST00000590096 OASLQ15646 514 aaKnown RBP21.35■■□□□ 1.01
ATG4D-212ENST00000590096 CCNG2Q16589 344 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 QPCTQ16769 361 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 KDELC1Q6UW63 502 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 KYAT3Q6YP21 454 aaKnown RBP21.35■■□□□ 1.01
ATG4D-212ENST00000590096 TSPAN33Q86UF1 283 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 RASGEF1CQ8N431 466 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 MINDY1Q8N5J2 469 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 IPMKQ8NFU5 416 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 CENPTQ96BT3 561 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 OXNAD1Q96HP4 312 aaPredicted RBP21.35■■□□□ 1.01
ATG4D-212ENST00000590096 FSD1LQ9BXM9 530 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 GDF3Q9NR23 364 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 KCND1Q9NSA2 647 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 HOMER3Q9NSC5 361 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 SNX12Q9UMY4 172 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 AAR2Q9Y312 384 aaKnown RBP21.35■■□□□ 1.01
ATG4D-212ENST00000590096 SNX11Q9Y5W9 270 aa21.35■■□□□ 1.01
ATG4D-212ENST00000590096 TP53BP1Q12888 1972 aaPredicted RBP21.34■■□□□ 1.01
ATG4D-212ENST00000590096 GOLGA6CA6NDK9 693 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 GOLGA6BA6NDN3 693 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 GCATO75600 419 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 RECQL5O94762 991 aaPredicted RBP21.34■■□□□ 1.01
ATG4D-212ENST00000590096 GOLGA6DP0CG33 693 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 LHCGRP22888 699 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 ACTN2P35609 894 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 CTSKP43235 329 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 GDF10P55107 478 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 BNC1Q01954 994 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 AGERQ15109 404 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 IRF4Q15306 451 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 STPG1Q5TH74 334 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 LRRC66Q68CR7 880 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 CRTC1Q6UUV9 634 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 ABI3BPQ7Z7G0 1075 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 TP53I13Q8NBR0 393 aaPredicted RBP21.34■■□□□ 1.01
ATG4D-212ENST00000590096 LRRC45Q96CN5 670 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 SMIM14Q96QK8 99 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 LYSMD1Q96S90 227 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 NAPGQ99747 312 aaPredicted RBP21.34■■□□□ 1.01
ATG4D-212ENST00000590096 GAREM1Q9H706 876 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 KCTD5Q9NXV2 234 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 GOLGA6AQ9NYA3 693 aa21.34■■□□□ 1.01
ATG4D-212ENST00000590096 POM121BA6NF01 834 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 C4orf47A7E2U8 309 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 PGRMC1O00264 195 aaKnown RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 CES2O00748 559 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 CDX4O14627 284 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 IFNB1P01574 187 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 ITGAVP06756 1048 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 TCP1P17987 556 aaKnown RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 IGFALSP35858 605 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 RABIFP47224 123 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 LIMK1P53667 647 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 NXPH1P58417 271 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 PTPRRQ15256 657 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 HLA-BQ31612 363 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 P3H1Q32P28 736 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 DRICH1Q6PGQ1 229 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 DCP2Q8IU60 420 aaKnown RBP21.33■■□□□ 1.01
ATG4D-212ENST00000590096 OR13H1Q8NG92 308 aa21.33■■□□□ 1.01
ATG4D-212ENST00000590096 RTP4Q96DX8 246 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms