RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TOB1P50616 345 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 DUSP3P51452 185 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 MFAP3P55082 362 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 CDH8P55286 799 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 E2F1Q01094 437 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 PNOCQ13519 176 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 BRD3Q15059 726 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 RILPL1Q5EBL4 403 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 TMEM215Q68D42 235 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 KIAA0895LQ68EN5 471 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 SPECC1LQ69YQ0 1117 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 GALNT17Q6IS24 598 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 TMCO3Q6UWJ1 677 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 ZNF761Q86XN6 746 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 SLC25A45Q8N413 288 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 MSANTD4Q8NCY6 345 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 ADAMTS17Q8TE56 1095 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 SPATA17Q96L03 361 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 BAG1Q99933 345 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 ACBD6Q9BR61 282 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 BOCQ9BWV1 1114 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 ZCCHC4Q9H5U6 513 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 GDF3Q9NR23 364 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 AASDHPPTQ9NRN7 309 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 DPP3Q9NY33 737 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 ZFP69BQ9UJL9 534 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 CPSF3Q9UKF6 684 aaKnown RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 RAB21Q9UL25 225 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 CLEC4EQ9ULY5 219 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 NME7Q9Y5B8 376 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 SRPRBQ9Y5M8 271 aaKnown RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 NAV3Q8IVL0 2385 aa8.01□□□□□ -1.13
SMAD4-209ENST00000589941 TNRC6AQ8NDV7 1962 aaKnown RBP8.01□□□□□ -1.13
SMAD4-209ENST00000589941 DCHS2Q6V1P9 2916 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 CCDC151A5D8V7 595 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 WIPF3A6NGB9 483 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 FAM47DPA6NHR8 397 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 C10orf142B7Z368 130 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 E9PMD0 336 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 OGTO15294 1046 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 YKT6O15498 198 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 TNFSF15O95150 251 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 SERPINC1P01008 464 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 MMEP08473 750 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 RPA1P27694 616 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 CD38P28907 300 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 ARRB1P49407 418 aaPredicted RBP8□□□□□ -1.13
SMAD4-209ENST00000589941 RPS14P62263 151 aaKnown RBP8□□□□□ -1.13
SMAD4-209ENST00000589941 NOP14P78316 857 aaKnown RBP8□□□□□ -1.13
SMAD4-209ENST00000589941 ASIC1P78348 528 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 MYL7Q01449 175 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 CUL4BQ13620 913 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 DRAP1Q14919 205 aaPredicted RBP8□□□□□ -1.13
SMAD4-209ENST00000589941 POSTNQ15063 836 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 C1QL3Q5VWW1 255 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 CRTC1Q6UUV9 634 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 UBE2R2Q712K3 238 aaPredicted RBP8□□□□□ -1.13
SMAD4-209ENST00000589941 STPG3Q8N7X2 389 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 IQUBQ8NA54 791 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 MNS1Q8NEH6 495 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 OR2T3Q8NH03 318 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 SSC4DQ8WTU2 575 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 ARRDC3Q96B67 414 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 FUBP3Q96I24 572 aaKnown RBP eCLIP8□□□□□ -1.13
SMAD4-209ENST00000589941 XPO6Q96QU8 1125 aaKnown RBP8□□□□□ -1.13
SMAD4-209ENST00000589941 NAP1L4Q99733 375 aaKnown RBP8□□□□□ -1.13
SMAD4-209ENST00000589941 SYT15Q9BQS2 421 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 CARD6Q9BX69 1037 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 BTBD1Q9H0C5 482 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 XYLT2Q9H1B5 865 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 MTG2Q9H4K7 406 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 ARHGAP20Q9P2F6 1191 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 NIPBLQ6KC79 2804 aaeCLIP8□□□□□ -1.13
SMAD4-209ENST00000589941 CROCCQ5TZA2 2017 aa8□□□□□ -1.13
SMAD4-209ENST00000589941 BMP15O95972 392 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 TUBBP07437 444 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 SFTPCP11686 197 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 CKMT1AP12532 417 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 RARGP13631 454 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 LMO2P25791 158 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 AOAHP28039 575 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 CASQ1P31415 396 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 FLT3P36888 993 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 RXRGP48443 463 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 ACOT2P49753 483 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 GYS2P54840 703 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 PPP2CBP62714 309 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 PPP2CAP67775 309 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 STRN3Q13033 797 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 TRIM29Q14134 588 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 FAM171BQ6P995 826 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 NCEH1Q6PIU2 408 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 SERPINA13PQ6UXR4 307 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 KCNK18Q7Z418 384 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 OR4C6Q8NH72 309 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 KBTBD7Q8WVZ9 684 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 MFSD3Q96ES6 412 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 BICD1Q96G01 975 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 WDR24Q96S15 920 aa7.99□□□□□ -1.13
SMAD4-209ENST00000589941 TACO1Q9BSH4 297 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms