RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 ESRP1Q6NXG1 681 aaKnown RBP16.23■□□□□ 0.19
NLE1-204ENST00000588019 ERAP2Q6P179 960 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 FBXL19Q6PCT2 694 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 PARS2Q7L3T8 475 aaKnown RBP16.23■□□□□ 0.19
NLE1-204ENST00000588019 TTC30BQ8N4P2 665 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 GABPB2Q8TAK5 448 aaPredicted RBP16.23■□□□□ 0.19
NLE1-204ENST00000588019 ARRDC3Q96B67 414 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 CERS2Q96G23 380 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 ZNF778Q96MU6 729 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 TRIM56Q9BRZ2 755 aaKnown RBP16.23■□□□□ 0.19
NLE1-204ENST00000588019 TMEM109Q9BVC6 243 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 HDAC8Q9BY41 377 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 ROPN1BQ9BZX4 212 aaPredicted RBP16.23■□□□□ 0.19
NLE1-204ENST00000588019 ROPN1Q9HAT0 212 aaPredicted RBP16.23■□□□□ 0.19
NLE1-204ENST00000588019 LMAN1LQ9HAT1 526 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 ZFYVE1Q9HBF4 777 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 FETUBQ9UGM5 382 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 PKP3Q9Y446 797 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 ARL5AQ9Y689 179 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 NFS1Q9Y697 457 aa16.23■□□□□ 0.19
NLE1-204ENST00000588019 C1orf232A0A0U1RR37 186 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 EXOC1LA0A1B0GW35 172 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 A0A1W2PQF6 199 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 STX7O15400 261 aaKnown RBP16.22■□□□□ 0.19
NLE1-204ENST00000588019 ATG13O75143 517 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 SHBGP04278 402 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 ZNF30P17039 623 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 PSMA3P25788 255 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 TARSP26639 723 aaKnown RBP16.22■□□□□ 0.19
NLE1-204ENST00000588019 VIPR1P32241 457 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 HMGCLP35914 325 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 HADHAP40939 763 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 NEK3P51956 506 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 ZNF140P52738 457 aaPredicted RBP16.22■□□□□ 0.19
NLE1-204ENST00000588019 FAM193AP78312 1265 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 MGAT5Q09328 741 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 ELP6Q0PNE2 266 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 SFSWAPQ12872 951 aaKnown RBP16.22■□□□□ 0.19
NLE1-204ENST00000588019 NAB1Q13506 487 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 UBXN2BQ14CS0 331 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 CNGA3Q16281 694 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 POM121L1PQ3SYA9 428 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 CRTC1Q6UUV9 634 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 ERN2Q76MJ5 926 aaKnown RBP16.22■□□□□ 0.19
NLE1-204ENST00000588019 LYSMD3Q7Z3D4 306 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 SIX5Q8N196 739 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 ZNF687Q8N1G0 1237 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 RAB7BQ96AH8 199 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 SMIM14Q96QK8 99 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 PCDH12Q9NPG4 1184 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 PPANQ9NQ55 473 aaKnown RBP16.22■□□□□ 0.19
NLE1-204ENST00000588019 NLE1Q9NVX2 485 aaPredicted RBP16.22■□□□□ 0.19
NLE1-204ENST00000588019 SCML1Q9UN30 329 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 MYO10Q9HD67 2058 aa16.22■□□□□ 0.19
NLE1-204ENST00000588019 CCDC78A2IDD5 438 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 NPIPB15A6NHN6 443 aaPredicted RBP16.21■□□□□ 0.19
NLE1-204ENST00000588019 FAM159BA6NKW6 160 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 FAM170BA6NMN3 283 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 CHURC1-FNTBB4DL54 471 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 AURKAO14965 403 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 SLC7A4O43246 635 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 TCEA3O75764 348 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 RPP40O75818 363 aaKnown RBP16.21■□□□□ 0.19
NLE1-204ENST00000588019 SASH3O75995 380 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 VAPBO95292 243 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 COPAP53621 1224 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 RPS14P62263 151 aaKnown RBP16.21■□□□□ 0.19
NLE1-204ENST00000588019 PRAMEP78395 509 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 ZBTB16Q05516 673 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 ARHGEF7Q14155 803 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 CDKN3Q16667 212 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 KBTBD12Q3ZCT8 623 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 KIAA1211LQ6NV74 962 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 TRMT10BQ6PF06 316 aaKnown RBP16.21■□□□□ 0.19
NLE1-204ENST00000588019 DPPA4Q7L190 304 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 KCNMB4Q86W47 210 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 OR4K2Q8NGD2 314 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 OR13J1Q8NGT2 312 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 OR2W6PQ8NHA6 318 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 OSBPL6Q9BZF3 934 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 C20orf96Q9NUD7 363 aaPredicted RBP16.21■□□□□ 0.19
NLE1-204ENST00000588019 IL17CQ9P0M4 197 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 VPS18Q9P253 973 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 B4GALT6Q9UBX8 382 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 SLC2A6Q9UGQ3 507 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 SLC24A2Q9UI40 661 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 KCTD3Q9Y597 815 aa16.21■□□□□ 0.19
NLE1-204ENST00000588019 RASGRF2O14827 1237 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 CLDN7O95471 211 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 DNTTP04053 509 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 C7P10643 843 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 ADRB3P13945 408 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 COL9A1P20849 921 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 PTPN5P54829 565 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 THOC5Q13769 683 aaKnown RBP16.2■□□□□ 0.18
NLE1-204ENST00000588019 PTPRRQ15256 657 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 CEP85LQ5SZL2 805 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 ZDHHC20Q5W0Z9 365 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 LRRC66Q68CR7 880 aa16.2■□□□□ 0.18
NLE1-204ENST00000588019 LRRC6Q86X45 466 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms