RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 MAP4P27816 1152 aaKnown RBP14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 MMP12P39900 470 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 ATP11AP98196 1134 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 UGP2Q16851 508 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 COBLL1Q53SF7 1204 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 CFAP58Q5T655 872 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 FAM72AQ5TYM5 149 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 FAM72DQ6L9T8 149 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 FAM72BQ86X60 149 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 ZSWIM9Q86XI8 627 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 FAM114A1Q8IWE2 563 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 SRRM1Q8IYB3 904 aaKnown RBP14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 CCDC13Q8IYE1 715 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 BMPERQ8N8U9 685 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 GALNT11Q8NCW6 608 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 CPT1CQ8TCG5 803 aa14.18□□□□□ -0.14
CSNK1D-224ENST00000584672 A8MX80 341 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 B4E171 279 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 PSMA7O14818 248 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 STK17BO94768 372 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 PDGFAP04085 211 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 FURINP09958 794 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 RHOQP17081 205 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 POU3F2P20265 443 aaPredicted RBP14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 KELP23276 732 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 F8A1P23610 371 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 KRT9P35527 623 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 TSPAN7P41732 249 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 GNPDA1P46926 289 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 COPB1P53618 953 aaKnown RBP14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 SNX16P57768 344 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 RAB15P59190 212 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 KRT85P78386 507 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 MC1RQ01726 317 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 NR1D2Q14995 579 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 CDO1Q16878 200 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 TCTN3Q6NUS6 607 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 ERAP2Q6P179 960 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 NLRP14Q86W24 1093 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 C17orf82Q86X59 251 aaPredicted RBP14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 TRIM59Q8IWR1 403 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 PTCD2Q8WV60 388 aaKnown RBP14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 EFHD1Q9BUP0 239 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 SPRY4Q9C004 299 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 MAGEH1Q9H213 219 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 WDR26Q9H7D7 661 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 PPARGC1AQ9UBK2 798 aaKnown RBP14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 AJAP1Q9UKB5 411 aaPredicted RBP14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 KCTD3Q9Y597 815 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 SHANK1Q9Y566 2161 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 C2CD3Q4AC94 2353 aa14.17□□□□□ -0.14
CSNK1D-224ENST00000584672 FBN2P35556 2912 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 TRBV23OR9-2A0A075B6M9 112 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 ZW10O43264 779 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 KDELR3O43731 214 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 TNFRSF8P28908 595 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 MAPKAPK2P49137 400 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 ABHD18Q0P651 414 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 ILF3Q12906 894 aaKnown RBP eCLIP14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 ERV3-1Q14264 604 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 AGERQ15109 404 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 CLPPQ16740 277 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 EIF2S3LQ2VIR3 472 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 ACBD5Q5T8D3 534 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 MANEALQ5VSG8 457 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 ENOSF1Q7L5Y1 443 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 MAMDC2Q7Z304 686 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 TMEM135Q86UB9 458 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 NAGSQ8N159 534 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 EMC1Q8N766 993 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 PAF1Q8N7H5 531 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 TEFMQ96QE5 360 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 PHF12Q96QT6 1004 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 GSDMCQ9BYG8 508 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 SUV39H2Q9H5I1 410 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 GDPD2Q9HCC8 539 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 TMEM248Q9NWD8 314 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 OR12D3Q9UGF7 316 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 TLK1Q9UKI8 766 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 ATP8A1Q9Y2Q0 1164 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 MFHAS1Q9Y4C4 1052 aa14.16□□□□□ -0.14
CSNK1D-224ENST00000584672 TNFRSF10CO14798 259 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 DNAJB5O75953 348 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 CLDN1O95832 211 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 FUCA1P04066 466 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 ELFN1P0C7U0 828 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 SLC9A1P19634 815 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 BMP6P22004 513 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 STAT1P42224 750 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 STAT5AP42229 794 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 GPR3P46089 330 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 STX17P56962 302 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 PTK2Q05397 1052 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 RALGDSQ12967 914 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 STIM1Q13586 685 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 TTI2Q6NXR4 508 aa14.15□□□□□ -0.14
CSNK1D-224ENST00000584672 TRIM65Q6PJ69 517 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms