RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 HHIPL1Q96JK4 782 aa13.73□□□□□ -0.21
SRSF1-205ENST00000582730 ELAC1Q9H777 363 aaKnown RBP13.73□□□□□ -0.21
SRSF1-205ENST00000582730 ARHGAP26Q9UNA1 814 aa13.73□□□□□ -0.21
SRSF1-205ENST00000582730 TARM1B6A8C7 271 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 GRID2O43424 1007 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 TSPAN3O60637 253 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 LTA4HP09960 611 aaKnown RBP13.72□□□□□ -0.21
SRSF1-205ENST00000582730 ATXN1LP0C7T5 689 aaKnown RBP13.72□□□□□ -0.21
SRSF1-205ENST00000582730 COL6A1P12109 1028 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 TSPAN8P19075 237 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 ITGAXP20702 1163 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 ATP5F1P24539 256 aaPredicted RBP13.72□□□□□ -0.21
SRSF1-205ENST00000582730 POLD2P49005 469 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 SCNN1BP51168 640 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 YBEYP58557 167 aaPredicted RBP13.72□□□□□ -0.21
SRSF1-205ENST00000582730 TBL3Q12788 808 aaKnown RBP13.72□□□□□ -0.21
SRSF1-205ENST00000582730 GPR158Q5T848 1215 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 SLC43A3Q8NBI5 491 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 SLC26A7Q8TE54 656 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 ANKRD49Q8WVL7 239 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 PYDC1Q8WXC3 89 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 TSPAN17Q96FV3 270 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 ALG9Q9H6U8 611 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 IGSF5Q9NSI5 407 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 DNMT3LQ9UJW3 386 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 VWA7Q9Y334 891 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 DOCK4Q8N1I0 1966 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 DRGXA6NNA5 263 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 PRAMEF11O60813 436 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 SERPINF2P08697 491 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 KCNA5P22460 613 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 GLDCP23378 1020 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 PIK3R1P27986 724 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 GRIA2P42262 883 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
SRSF1-205ENST00000582730 SPOUT1Q5T280 376 aaKnown RBP13.72□□□□□ -0.21
SRSF1-205ENST00000582730 HPS6Q86YV9 775 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 TEX26Q8N6G2 289 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 NAT14Q8WUY8 206 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
SRSF1-205ENST00000582730 SLC7A4O43246 635 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 ACSL4O60488 711 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 IGLV3-27P01718 113 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 PABPC4LP0CB38 370 aaKnown RBP13.71□□□□□ -0.21
SRSF1-205ENST00000582730 PMLP29590 882 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 LEPRP48357 1165 aaKnown RBP13.71□□□□□ -0.21
SRSF1-205ENST00000582730 MAPKAPK2P49137 400 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 SLC11A2P49281 568 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 CDKN2DP55273 166 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 RING1Q06587 406 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 BBS5Q8N3I7 341 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 OR52K2Q8NGK3 314 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 RANBP9Q96S59 729 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 CINPQ9BW66 212 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-205ENST00000582730 PREBQ9HCU5 417 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 GKN1Q9NS71 199 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 CDH22Q9UJ99 828 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 UBA6A0AVT1 1052 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-205ENST00000582730 CFLARO15519 480 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 LDB2O43679 373 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 GLP2RO95838 553 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 GOT2P00505 430 aaKnown RBP13.71□□□□□ -0.21
SRSF1-205ENST00000582730 GNA12Q03113 381 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 TECRLQ5HYJ1 363 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 C16orf59Q7L2K0 433 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 FAM126BQ8IXS8 530 aa13.71□□□□□ -0.21
SRSF1-205ENST00000582730 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.21
SRSF1-205ENST00000582730 MRPL9Q9BYD2 267 aaKnown RBP13.71□□□□□ -0.21
SRSF1-205ENST00000582730 PLXNA3P51805 1871 aa13.71□□□□□ -0.22
SRSF1-205ENST00000582730 CBX4O00257 560 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 MT-CO1P00395 513 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 SFT2D3Q587I9 215 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 METTL21CQ5VZV1 264 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 FAM219BQ5XKK7 198 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 PDSS2Q86YH6 399 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 SH3RF2Q8TEC5 729 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 HIC2Q96JB3 615 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 SMPD4Q9NXE4 827 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 CCDC162PA2VCL2 907 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 A8MT66 165 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 HOXA2O43364 376 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 PRSS56P0CW18 603 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 ARSAP15289 507 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 OXCT1P55809 520 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 FAM117BQ6P1L5 589 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 SPATA24Q86W54 205 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 UBA2Q9UBT2 640 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-205ENST00000582730 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 LOC285095A0A1B0GVY8 99 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 MROH6A6NGR9 719 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 SLCO1B7G3V0H7 640 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 OR6B1O95007 311 aa13.7□□□□□ -0.22
SRSF1-205ENST00000582730 PAPSS2O95340 614 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms