RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 JRKLQ9Y4A0 524 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 PCDHA3Q9Y5H8 950 aa13.32□□□□□ -0.28
RPAIN-216ENST00000575599 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 CCDC66A2RUB6 948 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 FTCDO95954 541 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 PCCBP05166 539 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 CTPS1P17812 591 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 NFKBIAP25963 317 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 CTNNA2P26232 953 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 GRK6P43250 576 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 NR2C2P49116 596 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 RWDD2BP57060 319 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 NIPAL4Q0D2K0 466 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 BNIP3Q12983 259 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 LRRC14Q15048 493 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 ACOX1Q15067 660 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 RPS6KA1Q15418 735 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 TRIP6Q15654 476 aaKnown RBP13.31□□□□□ -0.28
RPAIN-216ENST00000575599 PPP2R5EQ16537 467 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 ZNF542PQ5EBM4 170 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 DENND2CQ68D51 928 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 LIPIQ6XZB0 460 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 BZW1Q7L1Q6 419 aaKnown RBP13.31□□□□□ -0.28
RPAIN-216ENST00000575599 NT5DC3Q86UY8 548 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 ZC3H18Q86VM9 953 aaKnown RBP13.31□□□□□ -0.28
RPAIN-216ENST00000575599 ARRDC2Q8TBH0 407 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 SAP25Q8TEE9 199 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 AGAP3Q96P47 875 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 IL12RB2Q99665 862 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 TDRD1Q9BXT4 1180 aaKnown RBP13.31□□□□□ -0.28
RPAIN-216ENST00000575599 CAAP1Q9H8G2 361 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 DNAJC28Q9NX36 388 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 PHTF1Q9UMS5 762 aa13.31□□□□□ -0.28
RPAIN-216ENST00000575599 PACSIN2Q9UNF0 486 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-216ENST00000575599 CACNA1AO00555 2505 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 NPIPB15A6NHN6 443 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CBFA2T3O75081 653 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 RECQL5O94762 991 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-216ENST00000575599 PDHA1P08559 390 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 ALPIP09923 528 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CYP2A6P11509 494 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CA4P22748 312 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CES1P23141 567 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 VIPR1P32241 457 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CD86P42081 329 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 RXRGP48443 463 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 THOP1P52888 689 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 EPHB1P54762 984 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 PFN3P60673 137 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 FOXC1Q12948 553 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 FZD2Q14332 565 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 IHHQ14623 411 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 PRKD1Q15139 912 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-216ENST00000575599 PTPRRQ15256 657 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CNGA3Q16281 694 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 WSCD2Q2TBF2 565 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 TPRG1LQ5T0D9 272 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 AADACL2Q6P093 401 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 DBX2Q6ZNG2 339 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 USP45Q70EL2 814 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 PARGQ86W56 976 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 DCP2Q8IU60 420 aaKnown RBP13.3□□□□□ -0.28
RPAIN-216ENST00000575599 UBL4BQ8N7F7 174 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CNTD1Q8N815 330 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 LPCAT1Q8NF37 534 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 TFB1MQ8WVM0 346 aaKnown RBP13.3□□□□□ -0.28
RPAIN-216ENST00000575599 ALG3Q92685 438 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 WDR24Q96S15 920 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 BRD8Q9H0E9 1235 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 GPR27Q9NS67 375 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CHKBQ9Y259 395 aa13.3□□□□□ -0.28
RPAIN-216ENST00000575599 CABIN1Q9Y6J0 2220 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 SPTY2D1-AS1A0A0U1RR47 76 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 CFAP69A5D8W1 941 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 MIF4GDA9UHW6 222 aaKnown RBP13.29□□□□□ -0.28
RPAIN-216ENST00000575599 LHCGRP22888 699 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 COPS2P61201 443 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 BBS12Q6ZW61 710 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 TSPAN33Q86UF1 283 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 EID2Q8N6I1 236 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 BAHD1Q8TBE0 780 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-216ENST00000575599 PIH1D2Q8WWB5 315 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 SMIM14Q96QK8 99 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 CDC6Q99741 560 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 HERPUD2Q9BSE4 406 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 OSBPL8Q9BZF1 889 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 FTSJ1Q9UET6 329 aa13.29□□□□□ -0.28
RPAIN-216ENST00000575599 A0A0U1RQS6 177 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 APOC4-APOC2K7ER74 178 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 ENC1O14682 589 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 FFAR2O15552 330 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 FZD6O60353 706 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
RPAIN-216ENST00000575599 APOC2P02655 101 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 MMP2P08253 660 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 FTH1P19P0C7X4 201 aa13.28□□□□□ -0.28
RPAIN-216ENST00000575599 PYGMP11217 842 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms