RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RIBC2Q9H4K1 309 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CYP3A43Q9HB55 503 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ZSCAN32Q9NX65 697 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PPP2R2CQ9Y2T4 447 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 TMEM120BA0PK00 339 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 AQP12BA6NM10 295 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 H3BM21 787 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PRODHO43272 600 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ZSCAN12O43309 604 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CTIFO43310 598 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 SMAD6O43541 496 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 RECQL4O94761 1208 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ATF6P18850 670 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 GALP22466 123 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CCNE1P24864 410 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 MAP4P27816 1152 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 SULT2A1Q06520 285 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 PDK1Q15118 436 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FAM189A2Q15884 450 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 DPY19L2P1Q6NXN4 242 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 C6orf89Q6UWU4 347 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 C16orf59Q7L2K0 433 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 COMTD1Q86VU5 262 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CSGALNACT2Q8N6G5 542 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ATP6V0D2Q8N8Y2 350 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 ZNF248Q8NDW4 579 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SPPL3Q8TCT6 385 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 RMDN1Q96DB5 314 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 MCRS1Q96EZ8 462 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 CNOT6LQ96LI5 555 aaKnown RBP6.7□□□□□ -1.34
SMG1-217ENST00000569764 REEP2Q9BRK0 252 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 SLC39A1Q9NY26 324 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 WWOXQ9NZC7 414 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 NCKIPSDQ9NZQ3 722 aa6.7□□□□□ -1.34
SMG1-217ENST00000569764 FRMPD4Q14CM0 1322 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 IQANK1A0A1B0GTG1 560 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 NEMP2A6NFY4 417 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 FAM170BA6NMN3 283 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 PSMD11O00231 422 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 LILRB5O75023 590 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 SLC22A3O75751 556 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 AKR7A3O95154 331 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 DIRAS3O95661 229 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 IFNA14P01570 189 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 TPOP07202 933 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ALDH3A2P51648 485 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 INHBCP55103 352 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 GHRHRQ02643 423 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 PTK2Q05397 1052 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 KCNMA1Q12791 1236 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 GTF2H3Q13889 308 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 SMTNL2Q2TAL5 461 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 Q5PR19 223 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 RNASEH2BQ5TBB1 312 aaKnown RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 GTF2IRD2BQ6EKJ0 949 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 TPRG1Q6ZUI0 275 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 RHOUQ7L0Q8 258 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ZNF598Q86UK7 904 aaKnown RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 CUZD1Q86UP6 607 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 GTF2IRD2Q86UP8 949 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 UBLCP1Q8WVY7 318 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 FAM3CQ92520 227 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 SNX19Q92543 992 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 MUL1Q969V5 352 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 FAM129BQ96TA1 746 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 TUBGCP2Q9BSJ2 902 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 RTKNQ9BST9 563 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 C9orf16Q9BUW7 83 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 FRMD8Q9BZ67 464 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 TREM1Q9NP99 234 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 NXF1Q9UBU9 619 aaKnown RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 CAMK2AQ9UQM7 478 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CHMP2BQ9UQN3 213 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CASTOR2A6NHX0 329 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 HSBP1L1C9JCN9 74 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 SLC16A4O15374 487 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 LRP3O75074 770 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CFIP05156 583 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 GABRR2P28476 465 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ARL4DP49703 201 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 MAPK7Q13164 816 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 PMS2P11Q13670 270 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 UGCGQ16739 394 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 RTP2Q5QGT7 225 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 PMF1Q6P1K2 205 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 KIAA1324Q6UXG2 1013 aaKnown RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 FGD2Q7Z6J4 655 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ALDH16A1Q8IZ83 802 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CEP112Q8N8E3 955 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 HDAC10Q969S8 669 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CCDC127Q96BQ5 260 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ZNF669Q96BR6 464 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 LRRC39Q96DD0 335 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 CALN1Q9BXU9 219 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 NFKBIZQ9BYH8 718 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ZDHHC5Q9C0B5 715 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 SOHLH2Q9NX45 425 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 DPP3Q9NY33 737 aa6.69□□□□□ -1.34
SMG1-217ENST00000569764 ARMCX3Q9UH62 379 aaPredicted RBP6.69□□□□□ -1.34
SMG1-217ENST00000569764 DNAI1Q9UI46 699 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms