RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 GLT6D1Q7Z4J2 308 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 LSMEM2Q8N112 164 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 RBM15BQ8NDT2 890 aaKnown RBP18.18■□□□□ 0.5
SMPD3-211ENST00000568373 ANKRD49Q8WVL7 239 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 SGF29Q96ES7 293 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 POMKQ9H5K3 350 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 NCKIPSDQ9NZQ3 722 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 L3MBTL1Q9Y468 752 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 RAI2Q9Y5P3 530 aa18.18■□□□□ 0.5
SMPD3-211ENST00000568373 TYW5A2RUC4 315 aaKnown RBP18.17■□□□□ 0.5
SMPD3-211ENST00000568373 NPHS1O60500 1241 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 LUC7L3O95232 432 aaKnown RBP18.17■□□□□ 0.5
SMPD3-211ENST00000568373 PDHA1P08559 390 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 RBP1P09455 135 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 HOXB8P17481 243 aaPredicted RBP18.17■□□□□ 0.5
SMPD3-211ENST00000568373 GM2AP17900 193 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 GJA8P48165 433 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 PFKPQ01813 784 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 TAF1AQ15573 450 aaPredicted RBP18.17■□□□□ 0.5
SMPD3-211ENST00000568373 TYSND1Q2T9J0 566 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 SEL1L3Q68CR1 1132 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 SDCCAG8Q86SQ7 713 aaPredicted RBP18.17■□□□□ 0.5
SMPD3-211ENST00000568373 SPNS2Q8IVW8 549 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 FBXO27Q8NI29 283 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 CCDC126Q96EE4 140 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 TMA16Q96EY4 203 aaKnown RBP18.17■□□□□ 0.5
SMPD3-211ENST00000568373 FEM1AQ9BSK4 669 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 ZBP1Q9H171 429 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 MAN1C1Q9NR34 630 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 ASB3Q9Y575 518 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 PCDHGC4Q9Y5F7 938 aa18.17■□□□□ 0.5
SMPD3-211ENST00000568373 SLCO1B7G3V0H7 640 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 KIAA0355O15063 1070 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 FGF18O76093 207 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 CNPP09543 421 aaKnown RBP18.16■□□□□ 0.5
SMPD3-211ENST00000568373 RAG1P15918 1043 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 TFEBP19484 476 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 FDXRP22570 491 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 STC1P52823 247 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 E2F5Q15329 346 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 INO80DQ53TQ3 878 aaPredicted RBP18.16■□□□□ 0.5
SMPD3-211ENST00000568373 METTL21CQ5VZV1 264 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 ZNF549Q6P9A3 640 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 TMEM207Q6UWW9 146 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 ARHGAP24Q8N264 748 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 CCNYL1Q8N7R7 359 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 LPCAT1Q8NF37 534 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 C1orf21Q9H246 121 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 VTI1BQ9UEU0 232 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 STK39Q9UEW8 545 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 ZDHHC2Q9UIJ5 367 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 VPS28Q9UK41 221 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 OR51B4Q9Y5P0 310 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 NEMP2A6NFY4 417 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 C2orf81A6NN90 581 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 TGM5O43548 720 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 PEX11AO75192 247 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 BAIAP3O94812 1187 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 SNUPNO95149 360 aaKnown RBP18.16■□□□□ 0.5
SMPD3-211ENST00000568373 CTSAP10619 480 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 NCF2P19878 526 aaPredicted RBP18.16■□□□□ 0.5
SMPD3-211ENST00000568373 PSMA3P25788 255 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 GABRR2P28476 465 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 PGM1P36871 562 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 SERPINB5P36952 375 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 DNAL1Q4LDG9 190 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 TRIM67Q6ZTA4 783 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 PIM3Q86V86 326 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 FAM217AQ8IXS0 508 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 TMEM199Q8N511 208 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 MDGA1Q8NFP4 955 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 OR4K2Q8NGD2 314 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 ADGRE3Q9BY15 652 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 TCF7L2Q9NQB0 619 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 LHX3Q9UBR4 397 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.16■□□□□ 0.5
SMPD3-211ENST00000568373 PTPRSQ13332 1948 aa18.16■□□□□ 0.5
SMPD3-211ENST00000568373 DENND4CQ5VZ89 1909 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 PMLP29590 882 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 CA8P35219 290 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 CDH18Q13634 790 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 GPR158Q5T848 1215 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 ICE2Q659A1 982 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 AFTPHQ6ULP2 937 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 GAREM2Q75VX8 874 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 OTOP2Q7RTS6 562 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 SH3RF2Q8TEC5 729 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 STON2Q8WXE9 905 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 OR52B2Q96RD2 323 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 RNPEPL1Q9HAU8 725 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 INTS10Q9NVR2 710 aaKnown RBP18.15■□□□□ 0.5
SMPD3-211ENST00000568373 PCDH10Q9P2E7 1040 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 PLA2G4CQ9UP65 541 aa18.15■□□□□ 0.5
SMPD3-211ENST00000568373 A8MT66 165 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 ANKRD66B4E2M5 251 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 E9PBE3 544 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 GRID2O43424 1007 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 KLHL41O60662 606 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 MAGEC1O60732 1142 aa18.14■□□□□ 0.5
SMPD3-211ENST00000568373 ENTPD5O75356 428 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms