RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CCAR2Q8N163 923 aaKnown RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CFAP52Q8N1V2 620 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF276Q8N554 614 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 LRRC57Q8N9N7 239 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CCDC26Q8TAB7 109 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF564Q8TBZ8 553 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 KIAA1524Q8TCG1 905 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 FAM172AQ8WUF8 416 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 OVCA2Q8WZ82 227 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 KRT35Q92764 455 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 IGSF8Q969P0 613 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CEP295NLQ96MC4 621 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 NOX5Q96PH1 765 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 FERD3LQ96RJ6 166 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CNPY3Q9BT09 278 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 C6orf106Q9H6K1 298 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CD248Q9HCU0 757 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 KLHL11Q9NVR0 708 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ASNSD1Q9NWL6 643 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PFDN2Q9UHV9 154 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 ANAPC7Q9UJX3 599 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 AGO1Q9UL18 857 aaKnown RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CEP83Q9Y592 693 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 PCDHGB2Q9Y5G2 931 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 CAPN6Q9Y6Q1 641 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 SETD2Q9BYW2 2564 aaPredicted RBP6.29□□□□□ -1.4
UBFD1-204ENST00000565634 UNC13CQ8NB66 2214 aa6.29□□□□□ -1.4
UBFD1-204ENST00000565634 RP1L1Q8IWN7 2480 aaPredicted RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 CRYBG3Q68DQ2 2970 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 C3orf70A6NLC5 250 aaPredicted RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 AGRPO00253 132 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 GFRA2O00451 464 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 IRAK2O43187 625 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 TULP3O75386 442 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 MTA2O94776 668 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 CNTN5O94779 1100 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 PROSCO94903 275 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ECEL1O95672 775 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 FTCDO95954 541 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 MOCS2O96007 188 aaPredicted RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 GLI1P08151 1106 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 RALAP11233 206 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 IL4RP24394 825 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 DDX6P26196 483 aaKnown RBP eCLIP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 CORO1AP31146 461 aaKnown RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 L1CAMP32004 1257 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ADRA1BP35368 520 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 PTPN9P43378 593 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ACADVLP49748 655 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 PEX5P50542 639 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ARSEP51690 589 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 GABREP78334 506 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 DEUP1Q05D60 604 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 SPA17Q15506 151 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 SMTNL2Q2TAL5 461 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 FAM133BQ5BKY9 247 aaKnown RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 OGFOD2Q6N063 350 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 IL27RAQ6UWB1 636 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 B4GALNT4Q76KP1 1039 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 BEND5Q7L4P6 421 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 KIAA0907Q7Z7F0 614 aaPredicted RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 SLFN11Q7Z7L1 901 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 KIAA1328Q86T90 577 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 VPS36Q86VN1 386 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ZDHHC17Q8IUH5 632 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ZNF683Q8IZ20 524 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 OR52K2Q8NGK3 314 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 GRIN3AQ8TCU5 1115 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 WFDC5Q8TCV5 224 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 RNF139Q8WU17 664 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 GATAD2BQ8WXI9 593 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 CTNNBL1Q8WYA6 563 aaPredicted RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 RAPGEF5Q92565 580 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ALG3Q92685 438 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 LIN37Q96GY3 246 aaPredicted RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 WDR24Q96S15 920 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 PRMT1Q99873 361 aaKnown RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 DNAI2Q9GZS0 605 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 MKRN2Q9H000 416 aaKnown RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 TKTL2Q9H0I9 626 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 SIK2Q9H0K1 926 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ZWILCHQ9H900 591 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ETNK2Q9NVF9 386 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 DDIT4Q9NX09 232 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 DDX56Q9NY93 547 aaKnown RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 PLK2Q9NYY3 685 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 MPP6Q9NZW5 540 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 WDR35Q9P2L0 1181 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 UXTQ9UBK9 157 aaPredicted RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 ZC3H7BQ9UGR2 993 aaKnown RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 INTUQ9ULD6 942 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 FZD10Q9ULW2 581 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 G3BP2Q9UN86 482 aaKnown RBP6.28□□□□□ -1.4
UBFD1-204ENST00000565634 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 HS3ST4Q9Y661 456 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 F8P00451 2351 aa6.28□□□□□ -1.4
UBFD1-204ENST00000565634 TCRBV7S2A1N4TA0A589 114 aa6.27□□□□□ -1.41
UBFD1-204ENST00000565634 E2F8A0AVK6 867 aa6.27□□□□□ -1.41
UBFD1-204ENST00000565634 A1L4Q6 167 aa6.27□□□□□ -1.41
UBFD1-204ENST00000565634 GOLGA6L6A8MZA4 724 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms