RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 SNX25Q9H3E2 840 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 EHD1Q9H4M9 534 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 HMG20AQ9NP66 347 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 PSME2Q9UL46 239 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 HEATR9A2RTY3 570 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 DLGAP1O14490 977 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 SOCS2O14508 198 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 HOXA2O43364 376 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TRIM13O60858 407 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 SEC14L2O76054 403 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 CSPG5O95196 566 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 ITGB1P05556 798 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 MLNP12872 115 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 BRCC3P46736 316 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 HLCSP50747 726 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 PRAMEP78395 509 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 GNA12Q03113 381 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 MERTKQ12866 999 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 PDK2Q15119 407 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 MAPRE2Q15555 327 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 WSCD1Q658N2 575 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 KCTD8Q6ZWB6 473 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 NEK10Q6ZWH5 1172 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 ACOT1Q86TX2 421 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 MMAAQ8IVH4 418 aaKnown RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 TTC39CQ8N584 583 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 SNX31Q8N9S9 440 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 GOLM1Q8NBJ4 401 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 ZSCAN18Q8TBC5 510 aaPredicted RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 S100ZQ8WXG8 99 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 HPS1Q92902 700 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 UROC1Q96N76 676 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 CALN1Q9BXU9 219 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 KLHL25Q9H0H3 589 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 RMND5AQ9H871 391 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 NOL11Q9H8H0 719 aaKnown RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 C20orf96Q9NUD7 363 aaPredicted RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 CDYLQ9Y232 598 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 PRG3Q9Y2Y8 225 aaPredicted RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 NME7Q9Y5B8 376 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 PCDHGA7Q9Y5G6 932 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TIMM13Q9Y5L4 95 aaPredicted RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 C1orf232A0A0U1RR37 186 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 ABHD14A-ACY1A0A1B0GW23 586 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 STX16-NPEPL1H3BU86 382 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 AREL1O15033 823 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 JRKO75564 520 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 APOA4P06727 396 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 ZNF182P17025 639 aaPredicted RBP11.1□□□□□ -0.63
TCF4-222ENST00000564228 LMO2P25791 158 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 MIPP30301 263 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 RPL14P50914 215 aaKnown RBP11.1□□□□□ -0.63
TCF4-222ENST00000564228 MPP1Q00013 466 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 DSC1Q08554 894 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
TCF4-222ENST00000564228 TIGD5Q53EQ6 642 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 SLC9A4Q6AI14 798 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 NPNTQ6UXI9 565 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 OTOP2Q7RTS6 562 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 ZC3H7AQ8IWR0 971 aaKnown RBP11.1□□□□□ -0.63
TCF4-222ENST00000564228 CRIPAKQ8N1N5 446 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 WDTC1Q8N5D0 677 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 TMCO5AQ8N6Q1 288 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 JOSD2Q8TAC2 188 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 RDH11Q8TC12 318 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 LPGAT1Q92604 370 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 TMA16Q96EY4 203 aaKnown RBP11.1□□□□□ -0.63
TCF4-222ENST00000564228 NRBF2Q96F24 287 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 C9orf16Q9BUW7 83 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 NAA50Q9GZZ1 169 aaKnown RBP11.1□□□□□ -0.63
TCF4-222ENST00000564228 DPEP3Q9H4B8 488 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 RAD21L1Q9H4I0 556 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 FAM49BQ9NUQ9 324 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 ADA2Q9NZK5 511 aa11.1□□□□□ -0.63
TCF4-222ENST00000564228 ANKRD34BA5PLL1 514 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 G3V2L1 256 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SLC22A1O15245 554 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 MED7O43513 233 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 MPOP05164 745 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 UGT2B4P06133 528 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 CD1EP15812 388 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 SYN1P17600 705 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 TGM1P22735 817 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 HPCAL1P37235 193 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 DEFB103AP81534 67 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 OCA2Q04671 838 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 PRKAA1Q13131 559 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 PPP6R3Q5H9R7 873 aaPredicted RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 CYP4A22Q5TCH4 519 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 NAPRTQ6XQN6 538 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 ANKRD13BQ86YJ7 626 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 CDKL3Q8IVW4 592 aaPredicted RBP11.09□□□□□ -0.63
TCF4-222ENST00000564228 MPP5Q8N3R9 675 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 C12orf29Q8N999 325 aa11.09□□□□□ -0.63
TCF4-222ENST00000564228 BADQ92934 168 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms