RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MYL3P08590 195 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 KRT7P08729 469 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 RBP5P82980 135 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 TAF1CQ15572 869 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 C15orf59Q2T9L4 293 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 GTF2IRD2BQ6EKJ0 949 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 GK5Q6ZS86 529 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 SLCO6A1Q86UG4 719 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 GTF2IRD2Q86UP8 949 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 C7orf31Q8N865 590 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 SIGLEC10Q96LC7 697 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 ZNF385DQ9H6B1 395 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 MRPL40Q9NQ50 206 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.08□□□□□ -0.163e-6■■■■□ 22.8
GTF3C1-203ENST00000562609 PAK5Q9P286 719 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 DEAF1O75398 565 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 CCR10P46092 362 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 ZNF157P51786 506 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 PLA2G16P53816 162 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 PAGE2BQ5JRK9 111 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 PPP1R26Q5T8A7 1209 aaPredicted RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 OR6B2Q6IFH4 312 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 YME1L1Q96TA2 773 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 EMILIN2Q9BXX0 1053 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 UNC93B1Q9H1C4 597 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 CD320Q9NPF0 282 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 MRGBPQ9NV56 204 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 CACNG4Q9UBN1 327 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 ENPP5Q9UJA9 477 aa14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 PIN4Q9Y237 131 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 COPG1Q9Y678 874 aaKnown RBP14.08□□□□□ -0.16
GTF3C1-203ENST00000562609 COL1A2P08123 1366 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 AP3B1O00203 1094 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 DYRK3O43781 588 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 VDRP11473 427 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 TRAP1Q12931 704 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 TBCELQ5QJ74 424 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 XAF1Q6GPH4 301 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 TRNP1Q6NT89 227 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 CYP4V2Q6ZWL3 525 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 DHRSXQ8N5I4 330 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 PNPT1Q8TCS8 783 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 LRRN4Q8WUT4 740 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 LRRC39Q96DD0 335 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 DUS3LQ96G46 650 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 B3GNT5Q9BYG0 378 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 UPF3AQ9H1J1 476 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 LHX5Q9H2C1 402 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 DPEP3Q9H4B8 488 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 TRIM24O15164 1050 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 RFPL2O75678 378 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 RECQL4O94761 1208 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 MAP3K6O95382 1288 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 BMP4P12644 408 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 NCAM1P13591 858 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 IGFBP6P24592 240 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 ELK4P28324 431 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 GNG2P59768 71 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 MMRN1Q13201 1228 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 TUBA3CQ13748 450 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 HADHQ16836 314 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 CCNYL2Q5T2Q4 361 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 CCSAPQ6IQ19 270 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 DHFR2Q86XF0 187 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 SCUBE3Q8IX30 993 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 MFSD4AQ8N468 514 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 NATD1Q8N6N6 113 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 VPS33AQ96AX1 596 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 FUNDC2Q9BWH2 189 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 MOCS1Q9NZB8 636 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 OAZ3Q9UMX2 235 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 PSAT1Q9Y617 370 aa14.07□□□□□ -0.16
GTF3C1-203ENST00000562609 JUNP05412 331 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 JUNBP17275 347 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 MIPP30301 263 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 CAPGP40121 348 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 P2RX3P56373 397 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 STX1BP61266 288 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 MFSD10Q14728 455 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 DLG2Q15700 870 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 TAZQ16635 292 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 INSCQ1MX18 579 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 C6orf10Q5SRN2 563 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 RSBN1Q5VWQ0 802 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 SLX4IPQ5VYV7 408 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 PMF1Q6P1K2 205 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 SLC27A1Q6PCB7 646 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 CMC1Q7Z7K0 106 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 NIPA2Q8N8Q9 360 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 OR6B3Q8NGW1 331 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 HDAC11Q96DB2 347 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 NT5C1AQ9BXI3 368 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 CPNE5Q9HCH3 593 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 GMPR2Q9P2T1 348 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 CDYLQ9Y232 598 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 TESMINQ9Y4I5 508 aa14.06□□□□□ -0.16
GTF3C1-203ENST00000562609 EI24O14681 340 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms