RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 WDR26Q9H7D7 661 aa17.88■□□□□ 0.45
CMTM3-204ENST00000562357 DDX56Q9NY93 547 aaKnown RBP17.88■□□□□ 0.45
CMTM3-204ENST00000562357 CLCA2Q9UQC9 943 aa17.88■□□□□ 0.45
CMTM3-204ENST00000562357 LMO7DNF2Z398 122 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 APOL1O14791 398 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 KRT37O76014 449 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 HEXIM1O94992 359 aaKnown RBP17.87■□□□□ 0.45
CMTM3-204ENST00000562357 TNNT1P13805 278 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 CYLC1P35663 651 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-204ENST00000562357 MAGEA1P43355 309 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 TARDBPQ13148 414 aaKnown RBP eCLIP17.87■□□□□ 0.45
CMTM3-204ENST00000562357 C1orf61Q13536 156 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 CNGA3Q16281 694 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 ESRP1Q6NXG1 681 aaKnown RBP17.87■□□□□ 0.45
CMTM3-204ENST00000562357 MARCH9Q86YJ5 346 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 SDR16C5Q8N3Y7 309 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 PQLC3Q8N755 202 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 MDM1Q8TC05 714 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 SCRN2Q96FV2 425 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 TCEAL2Q9H3H9 227 aaPredicted RBP17.87■□□□□ 0.45
CMTM3-204ENST00000562357 DNPEPQ9ULA0 475 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 HEY1Q9Y5J3 304 aa17.87■□□□□ 0.45
CMTM3-204ENST00000562357 CPED1A4D0V7 1026 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 GOLGA6CA6NDK9 693 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 GOLGA6BA6NDN3 693 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 PSMD11O00231 422 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 PPP1R12AO14974 1030 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 TNFP01375 233 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 GOLGA6DP0CG33 693 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 TSHRP16473 764 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 KIAA1024LP59773 190 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 SRP54P61011 504 aaKnown RBP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 INSM1Q01101 510 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 TCEAL1Q15170 157 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 CDKN3Q16667 212 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 ALG11Q2TAA5 492 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 GKN2Q86XP6 184 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 RFX6Q8HWS3 928 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 CCDC170Q8IYT3 715 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 CACTIN-AS1Q8N1I8 211 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 OR56A4Q8NGH8 313 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 TPCN2Q8NHX9 752 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 IFI44Q8TCB0 444 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 MAPK15Q8TD08 544 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 NAT6Q93015 286 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 TSACCQ96A04 125 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 NSMCE3Q96MG7 304 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 CAAP1Q9H8G2 361 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 GOLGA6AQ9NYA3 693 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 DTLQ9NZJ0 730 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 DKK4Q9UBT3 224 aa17.86■□□□□ 0.45
CMTM3-204ENST00000562357 GOLGA4Q13439 2230 aaKnown RBP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 ARID1BQ8NFD5 2236 aaPredicted RBP17.86■□□□□ 0.45
CMTM3-204ENST00000562357 CLDN6P56747 220 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 DSC2Q02487 901 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 CYP4F3Q08477 520 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 CAMK2BQ13554 666 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 PDK1Q15118 436 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 C6orf132Q5T0Z8 1188 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 ALG1LQ6GMV1 187 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 LVRNQ6Q4G3 990 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 PLA2G15Q8NCC3 412 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 COQ10AQ96MF6 247 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 MCCC1Q96RQ3 725 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-204ENST00000562357 PHPT1Q9NRX4 125 aaPredicted RBP17.85■□□□□ 0.45
CMTM3-204ENST00000562357 AK5Q9Y6K8 562 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 FRYQ5TBA9 3013 aa17.85■□□□□ 0.45
CMTM3-204ENST00000562357 TDRD6O60522 2096 aaKnown RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 PTPRBP23467 1997 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 NPIPB15A6NHN6 443 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 OPA1O60313 960 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 GCATO75600 419 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 MT-CO3P00414 261 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 HOXC4P09017 264 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 CTPS1P17812 591 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 COMTP21964 271 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 PPIDQ08752 370 aaKnown RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 AP1B1Q10567 949 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 SLC9A4Q6AI14 798 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 PNCKQ6P2M8 343 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 BZW1Q7L1Q6 419 aaKnown RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 EFL1Q7Z2Z2 1120 aaKnown RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 FUBP1Q96AE4 644 aaKnown RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 RNF25Q96BH1 459 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 DTD2Q96FN9 168 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 MRFAP1L1Q96HT8 127 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 DEPDC7Q96QD5 511 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 BOCQ9BWV1 1114 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 NRSN2Q9GZP1 204 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 BRD8Q9H0E9 1235 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 MOSPD1Q9UJG1 213 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.84■□□□□ 0.45
CMTM3-204ENST00000562357 DGKBQ9Y6T7 804 aa17.84■□□□□ 0.45
CMTM3-204ENST00000562357 AKAP13Q12802 2813 aa17.83■□□□□ 0.45
CMTM3-204ENST00000562357 KMT2BQ9UMN6 2715 aaPredicted RBP17.83■□□□□ 0.45
CMTM3-204ENST00000562357 ANKRD36A6QL64 1941 aa17.83■□□□□ 0.44
CMTM3-204ENST00000562357 KCNK1O00180 336 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms