RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 WFIKKN2Q8TEU8 576 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 MASTLQ96GX5 879 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 SLF1Q9BQI6 1058 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 CTDSP1Q9GZU7 261 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 NLKQ9UBE8 527 aa3.84□□□□□ -1.79
SPG11-218ENST00000559754 RUSC2Q8N2Y8 1516 aa3.84□□□□□ -1.8
SPG11-218ENST00000559754 CH25HO95992 272 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 HSPA1AP0DMV8 641 aaKnown RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 HSPA1BP0DMV9 641 aaKnown RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 ABCD3P28288 659 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 PTPN9P43378 593 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 ECT2LQ008S8 904 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 CYP4A11Q02928 519 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 GRSF1Q12849 480 aaKnown RBP eCLIP3.83□□□□□ -1.8
SPG11-218ENST00000559754 MYBPHQ13203 477 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 SNTA1Q13424 505 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 ACVR2BQ13705 512 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 SF3B4Q15427 424 aaKnown RBP eCLIP3.83□□□□□ -1.83e-7■■□□□ 13
SPG11-218ENST00000559754 ZRSR1Q15695 479 aaKnown RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 GPR68Q15743 365 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 ME3Q16798 604 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 RILPL1Q5EBL4 403 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 XKR9Q5GH70 373 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 FAM76BQ5HYJ3 339 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 SNX30Q5VWJ9 437 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 SLC30A6Q6NXT4 461 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 LRRC8DQ7L1W4 858 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 GET4Q7L5D6 327 aaPredicted RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 EXOC3L1Q86VI1 746 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 ZSCAN30Q86W11 494 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 FOXP4Q8IVH2 680 aaPredicted RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 ZBTB8BQ8NAP8 495 aaPredicted RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 NEXN-AS1Q8NBZ9 246 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 CCDC191Q8NCU4 936 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 GPT2Q8TD30 523 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 TRIB2Q92519 343 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 INPP4AQ96PE3 977 aaPredicted RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 TXLNGYQ9BZA5 131 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 SYNCQ9H7C4 482 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 SPATS2LQ9NUQ6 558 aaKnown RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 ARGLU1Q9NWB6 273 aaPredicted RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 ANKRD10Q9NXR5 420 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 DNAJC16Q9Y2G8 782 aa3.83□□□□□ -1.8
SPG11-218ENST00000559754 TCF20Q9UGU0 1960 aaKnown RBP3.83□□□□□ -1.8
SPG11-218ENST00000559754 SCN5AQ14524 2016 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 SAA2-SAA4A0A096LPE2 208 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 MAGEA13PA6NCF6 341 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 H7C0S8 307 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 GAGE7O76087 117 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 DDNO94850 711 aaPredicted RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 VNN2O95498 520 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 ADAP00813 363 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 F7P08709 466 aaPredicted RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 PORP16435 677 aaPredicted RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 OAS2P29728 719 aaKnown RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 CTNNA1P35221 906 aaKnown RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 ACTN2P35609 894 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 HNF1BP35680 557 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 ARSFP54793 590 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 DLX5P56178 289 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 CALD1Q05682 793 aaKnown RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 SLC18A2Q05940 514 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 CDC16Q13042 620 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 GAGE1Q13065 139 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 GAGE4Q13068 117 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 MAMLD1Q13495 774 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 CAPSQ13938 189 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 BECN1Q14457 450 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 WTAPQ15007 396 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 HECTD3Q5T447 861 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 ZNF329Q86UD4 541 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 ADSSL1Q8N142 457 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 AADATQ8N5Z0 425 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 TMEM170AQ8WVE7 144 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 HSPH1Q92598 858 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 ATP6V1E2Q96A05 226 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 MTBPQ96DY7 904 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 RNFT2Q96EX2 444 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 BICD1Q96G01 975 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 RADILQ96JH8 1075 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 LRFN5Q96NI6 719 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 OR1F2PQ96R84 312 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 EIF2B3Q9NR50 452 aaKnown RBP3.82□□□□□ -1.8
SPG11-218ENST00000559754 GDAQ9Y2T3 454 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 SNX8Q9Y5X2 465 aa3.82□□□□□ -1.8
SPG11-218ENST00000559754 VWA3AA6NCI4 1184 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 STX16-NPEPL1H3BU86 382 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 AP3D1O14617 1153 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 STX16O14662 325 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 TIMM23O14925 209 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 GRID2O43424 1007 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 SLC25A17O43808 307 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 TSPAN9O75954 239 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 F9P00740 461 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 APOA4P06727 396 aa3.81□□□□□ -1.8
SPG11-218ENST00000559754 ADRB2P07550 413 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms