RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 FBXL12Q9NXK8 326 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 EBF1Q9UH73 591 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 AMACRQ9UHK6 382 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 CYP8B1Q9UNU6 501 aa12.12□□□□□ -0.47
HMGB1P8-201ENST00000558211 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 C5orf60A6NFR6 353 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 PMPCBO75439 489 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 PAPSS2O95340 614 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 MT-CYBP00156 380 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 SERPINF2P08697 491 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 C5AR1P21730 350 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 PSMB4P28070 264 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 SERPINA4P29622 427 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 MAPK8P45983 427 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 TERF1P54274 439 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 C2orf54Q08AI8 447 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 TRAF2Q12933 501 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 GRM3Q14832 879 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 TTC31Q49AM3 519 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF805Q5CZA5 627 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 LRRC73Q5JTD7 316 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 FAXCQ5TGI0 409 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 ITPRIPL1Q6GPH6 555 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 RASSF3Q86WH2 238 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 AADATQ8N5Z0 425 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 FRMD1Q8N878 549 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 GLIS1Q8NBF1 620 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 CPEB1Q9BZB8 566 aaKnown RBP12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 SLC25A51Q9H1U9 297 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 PABPC3Q9H361 631 aaKnown RBP12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 FBXO4Q9UKT5 387 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 NCKAP1Q9Y2A7 1128 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 RAI2Q9Y5P3 530 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 CUL9Q8IWT3 2517 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 NUMA1Q14980 2115 aa12.11□□□□□ -0.47
HMGB1P8-201ENST00000558211 EML5Q05BV3 1969 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 FAM47DPA6NHR8 397 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 C16orf96A6NNT2 1141 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF500O60304 480 aaPredicted RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 OPHN1O60890 802 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 TNFRSF21O75509 655 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 GCATO75600 419 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZNF189O75820 626 aaPredicted RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 METTL18O95568 372 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 KRT14P02533 472 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 PRKCGP05129 697 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 MMP2P08253 660 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 SP9P0CG40 484 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 CES1P23141 567 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 VPS41P49754 854 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 TPMTP51580 245 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 LMNB2Q03252 620 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 ZBTB16Q05516 673 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 CKAP4Q07065 602 aaKnown RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 CNTN1Q12860 1018 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 PRPSAP1Q14558 356 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 IHHQ14623 411 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 CYP1B1Q16678 543 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 P3H1Q32P28 736 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 PARS2Q7L3T8 475 aaKnown RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 TTC7BQ86TV6 843 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 PRPF39Q86UA1 669 aaKnown RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 C12orf50Q8NA57 414 aaPredicted RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 IMP4Q96G21 291 aaKnown RBP12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 PPP1R16AQ96I34 528 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 LRIG1Q96JA1 1093 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 FCRL5Q96RD9 977 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 TUBGCP5Q96RT8 1024 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 KRT12Q99456 494 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 GBA3Q9H227 469 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 NEUROG2Q9H2A3 272 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 ITM2CQ9NQX7 267 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 SERGEFQ9UGK8 458 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
HMGB1P8-201ENST00000558211 PRR23AA6NEV1 266 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 H0Y858 1186 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 CCDC188H7C350 402 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 M0R082 166 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 PDHA1P08559 390 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 TDGF1P13385 188 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ITIH2P19823 946 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 ITGB7P26010 798 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 RPL22P35268 128 aaKnown RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 DRD3P35462 400 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 P2RY2P41231 377 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 FNTAP49354 379 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 NEK3P51956 506 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 EPHB1P54762 984 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 SEMG2Q02383 582 aa12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 SRSF5Q13243 272 aaKnown RBP12.09□□□□□ -0.47
HMGB1P8-201ENST00000558211 PPP1R7Q15435 360 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms