RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 MRPS7Q9Y2R9 242 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 TNPO3Q9Y5L0 923 aaKnown RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 BLMP54132 1417 aaPredicted RBP6.23□□□□□ -1.41
TDP1-215ENST00000556498 CFAP43Q8NDM7 1665 aa6.23□□□□□ -1.41
TDP1-215ENST00000556498 NRXN1Q9ULB1 1477 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 POLR1AO95602 1720 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 PARD3Q8TEW0 1356 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 CCDC160A6NGH7 325 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 CCDC85CA6NKD9 419 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 A8MXQ7 604 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 AHRRA9YTQ3 701 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 WDR64B1ANS9 1081 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 B2RBV5 119 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 F5H0A9 414 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 RBAK-RBAKDNI3L0D1 243 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PSMA7O14818 248 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SULT1C4O75897 302 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 RECQL4O94761 1208 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TBX18O95935 607 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 IFNB1P01574 187 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 CSF2P04141 144 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 HBQ1P09105 142 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SPATA31D3P0C874 917 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 MLNP12872 115 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 IFNAR1P17181 557 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SLC7A1P30825 629 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PPM1AP35813 382 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SYKP43405 635 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 CAPZA2P47755 286 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 CASP4P49662 377 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 P2RY4P51582 365 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 CLCN5P51795 746 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PGDP52209 483 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 VAV2P52735 878 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 EPHB4P54760 987 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SLC12A3P55017 1021 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 DCAF7P61962 342 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SKP1P63208 163 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 POU6F2P78424 691 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 RBP5P82980 135 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 IFITM2Q01629 132 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ART3Q13508 389 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 KCNC3Q14003 757 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SMCO1Q147U7 214 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ODF1Q14990 250 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 C16orf72Q14CZ0 275 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 POLD3Q15054 466 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 PPP1R3AQ16821 1122 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 GALNTL6Q49A17 601 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 KCTD21Q4G0X4 260 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ANO6Q4KMQ2 910 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 EPC2Q52LR7 807 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 EARS2Q5JPH6 523 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 IFIT1BQ5T764 474 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 CDKAL1Q5VV42 579 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TDRD10Q5VZ19 366 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 SCYL2Q6P3W7 929 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TTC33Q6PID6 262 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 DCLRE1AQ6PJP8 1040 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SPATA31D4Q6ZUB0 917 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 C22orf34Q6ZV56 151 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ASRGL1Q7L266 308 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 CAMKMTQ7Z624 323 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ANKS1BQ7Z6G8 1248 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TAF8Q7Z7C8 310 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 USP37Q86T82 979 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 NELFCDQ8IXH7 590 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 GSPT2Q8IYD1 628 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 CCDC105Q8IYK2 499 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ULK2Q8IYT8 1036 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PDIK1LQ8N165 341 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SLC37A3Q8NCC5 494 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PSD4Q8NDX1 1056 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 BBS1Q8NFJ9 593 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 GPR156Q8NFN8 814 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 OR13C3Q8NGS6 347 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SLC30A5Q8TAD4 765 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SHKBP1Q8TBC3 707 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PNPT1Q8TCS8 783 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 ST7LQ8TDW4 575 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 UCMAQ8WVF2 138 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 JADE3Q92613 823 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TNFRSF14Q92956 283 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 NKD2Q969F2 451 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 MARC2Q969Z3 335 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 DYDC2Q96IM9 177 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 UBXN10Q96LJ8 280 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 C9orf72Q96LT7 481 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 TEKT5Q96M29 485 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ATP6V0BQ99437 205 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 DNAJC7Q99615 494 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 SEC22CQ9BRL7 303 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 MCMBPQ9BTE3 642 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 METTL22Q9BUU2 404 aaPredicted RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 SLC25A23Q9BV35 468 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 PAPOLGQ9BWT3 736 aaKnown RBP6.22□□□□□ -1.41
TDP1-215ENST00000556498 ZYG11BQ9C0D3 744 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 HDHD2Q9H0R4 259 aa6.22□□□□□ -1.41
TDP1-215ENST00000556498 ALX4Q9H161 411 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms