RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GABRB2P47870 512 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 LEPRP48357 1165 aaKnown RBP17.02■□□□□ 0.32
NEK9-204ENST00000554258 CENPCQ03188 943 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 PDCLQ13371 301 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 NADK2Q4G0N4 442 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 TDRD12Q587J7 1177 aaKnown RBP17.02■□□□□ 0.32
NEK9-204ENST00000554258 DCAF12Q5T6F0 453 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 CXorf57Q6NSI4 855 aaKnown RBP17.02■□□□□ 0.32
NEK9-204ENST00000554258 RD3Q7Z3Z2 195 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 PHF13Q86YI8 300 aaPredicted RBP17.02■□□□□ 0.32
NEK9-204ENST00000554258 PASD1Q8IV76 773 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 NRSN1Q8IZ57 195 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 ATP11CQ8NB49 1132 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 C1orf131Q8NDD1 294 aaKnown RBP17.02■□□□□ 0.32
NEK9-204ENST00000554258 AGBL5Q8NDL9 886 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 ANP32BQ92688 251 aaKnown RBP17.02■□□□□ 0.32
NEK9-204ENST00000554258 TSACCQ96A04 125 aaPredicted RBP17.02■□□□□ 0.32
NEK9-204ENST00000554258 CCDC74BQ96LY2 380 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 SERPINB11Q96P15 392 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 FEM1AQ9BSK4 669 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 VPS28Q9UK41 221 aa17.02■□□□□ 0.32
NEK9-204ENST00000554258 CROCCQ5TZA2 2017 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 A0A087X0T9 212 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 IGHV5-10-1A0A0J9YXX1 117 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 NEMP1O14524 444 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 AP1G1O43747 822 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 SORBS2O94875 1100 aaKnown RBP17.01■□□□□ 0.31
NEK9-204ENST00000554258 RASGRP1O95267 797 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 FAM228BP0C875 321 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 MMP8P22894 467 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 CSTF2P33240 577 aaKnown RBP eCLIP17.01■□□□□ 0.31
NEK9-204ENST00000554258 ABHD18Q0P651 414 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 PTP4A2Q12974 167 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 PRR30Q53SZ7 412 aaPredicted RBP17.01■□□□□ 0.31
NEK9-204ENST00000554258 NAA35Q5VZE5 725 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 ACAD10Q6JQN1 1059 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 PPP1R2P3Q6NXS1 205 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 VPS36Q86VN1 386 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 TMTC1Q8IUR5 882 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 ASB12Q8WXK4 309 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 ALG14Q96F25 216 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 CPXM1Q96SM3 734 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 NUDT22Q9BRQ3 303 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 ISCUQ9H1K1 167 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 RUBCNLQ9H714 662 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 NHEJ1Q9H9Q4 299 aaPredicted RBP17.01■□□□□ 0.31
NEK9-204ENST00000554258 HS3ST2Q9Y278 367 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 PCDHB3Q9Y5E6 796 aa17.01■□□□□ 0.31
NEK9-204ENST00000554258 TSPAN6O43657 245 aa17■□□□□ 0.31
NEK9-204ENST00000554258 LEFTY1O75610 366 aa17■□□□□ 0.31
NEK9-204ENST00000554258 MT-CO1P00395 513 aa17■□□□□ 0.31
NEK9-204ENST00000554258 APOEP02649 317 aa17■□□□□ 0.31
NEK9-204ENST00000554258 LTFP02788 710 aa17■□□□□ 0.31
NEK9-204ENST00000554258 RGS7P49802 495 aa17■□□□□ 0.31
NEK9-204ENST00000554258 B4GALNT1Q00973 533 aa17■□□□□ 0.31
NEK9-204ENST00000554258 ALG11Q2TAA5 492 aa17■□□□□ 0.31
NEK9-204ENST00000554258 PTPN20Q4JDL3 420 aa17■□□□□ 0.31
NEK9-204ENST00000554258 C14orf28Q4W4Y0 310 aa17■□□□□ 0.31
NEK9-204ENST00000554258 TTC39BQ5VTQ0 682 aaPredicted RBP17■□□□□ 0.31
NEK9-204ENST00000554258 ANKS6Q68DC2 871 aa17■□□□□ 0.31
NEK9-204ENST00000554258 FAM129CQ86XR2 697 aa17■□□□□ 0.31
NEK9-204ENST00000554258 CCDC170Q8IYT3 715 aa17■□□□□ 0.31
NEK9-204ENST00000554258 CPA5Q8WXQ8 436 aa17■□□□□ 0.31
NEK9-204ENST00000554258 CENPTQ96BT3 561 aa17■□□□□ 0.31
NEK9-204ENST00000554258 SLC39A13Q96H72 371 aa17■□□□□ 0.31
NEK9-204ENST00000554258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17■□□□□ 0.31
NEK9-204ENST00000554258 TAS2R14Q9NYV8 317 aa17■□□□□ 0.31
NEK9-204ENST00000554258 POLHQ9Y253 713 aa17■□□□□ 0.31
NEK9-204ENST00000554258 OAS3Q9Y6K5 1087 aaKnown RBP17■□□□□ 0.31
NEK9-204ENST00000554258 PKDREJQ9NTG1 2253 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 K7ERQ8 282 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 NUDT21O43809 227 aaKnown RBP16.99■□□□□ 0.31
NEK9-204ENST00000554258 FBXO21O94952 628 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 LCA5LO95447 670 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 GSCP56915 257 aaPredicted RBP16.99■□□□□ 0.31
NEK9-204ENST00000554258 SNX16P57768 344 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 RAB15P59190 212 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 NNTQ13423 1086 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 SLC18A3Q16572 532 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 RABGAP1LQ5R372 815 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 MON1BQ7L1V2 547 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 FAM46DQ8NEK8 389 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 DQX1Q8TE96 717 aaKnown RBP16.99■□□□□ 0.31
NEK9-204ENST00000554258 IRGQQ8WZA9 623 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 C18orf8Q96DM3 657 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 CCDC42Q96M95 316 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 BAG1Q99933 345 aaPredicted RBP16.99■□□□□ 0.31
NEK9-204ENST00000554258 KCND3Q9UK17 655 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 MRPS18BQ9Y676 258 aaKnown RBP16.99■□□□□ 0.31
NEK9-204ENST00000554258 POLEQ07864 2286 aa16.99■□□□□ 0.31
NEK9-204ENST00000554258 B4DGG1 531 aa16.98■□□□□ 0.31
NEK9-204ENST00000554258 E5RJQ4 531 aa16.98■□□□□ 0.31
NEK9-204ENST00000554258 TOR1BO14657 336 aa16.98■□□□□ 0.31
NEK9-204ENST00000554258 B4GAT1O43505 415 aa16.98■□□□□ 0.31
NEK9-204ENST00000554258 ERBB2P04626 1255 aa16.98■□□□□ 0.31
NEK9-204ENST00000554258 RRM1P23921 792 aa16.98■□□□□ 0.31
NEK9-204ENST00000554258 L1CAMP32004 1257 aa16.98■□□□□ 0.31
NEK9-204ENST00000554258 SCNN1AP37088 669 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms