RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 HAPLN1P10915 354 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 MTHFD1P11586 935 aaKnown RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 HMGA1P17096 107 aaKnown RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 CKMT2P17540 419 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ATF6P18850 670 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 HDCP19113 662 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ABCB4P21439 1286 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 PROZP22891 400 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 TNFRSF8P28908 595 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 RBMS1P29558 406 aaKnown RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 TNFSF9P41273 254 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 EFNA5P52803 228 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ADKP55263 362 aaKnown RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 NOMO3P69849 1222 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 DNAJC3Q13217 504 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 KCNB1Q14721 858 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 LINC00303Q3SY05 128 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 SLC39A12Q504Y0 691 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 HECTD2Q5U5R9 776 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ATF7IP2Q5U623 682 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ABHD17BQ5VST6 288 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 MOXD1Q6UVY6 613 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 KDM7AQ6ZMT4 941 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 THEM5Q8N1Q8 247 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 BEND2Q8NDZ0 799 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 MCPH1Q8NEM0 835 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 CCDC148Q8NFR7 591 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 DEPTORQ8TB45 409 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ETNPPLQ8TBG4 499 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 TBCKQ8TEA7 893 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 RUFY2Q8WXA3 655 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 RNF31Q96EP0 1072 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 BOD1Q96IK1 185 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 VCPIP1Q96JH7 1222 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 MRGPRX1Q96LB2 322 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 CCNL2Q96S94 520 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 DMRTA2Q96SC8 542 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 BRINP2Q9C0B6 783 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 SLC25A18Q9H1K4 315 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 TOR3AQ9H497 397 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 POLR1BQ9H9Y6 1135 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ZDHHC4Q9NPG8 344 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ITM2CQ9NQX7 267 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 WRAP73Q9P2S5 460 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 DEC1Q9P2X7 70 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 USP25Q9UHP3 1055 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 ARHGAP26Q9UNA1 814 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 MTO1Q9Y2Z2 717 aaKnown RBP6.19□□□□□ -1.42
ATXN3-223ENST00000553686 STK36Q9NRP7 1315 aa6.19□□□□□ -1.42
ATXN3-223ENST00000553686 THADAQ6YHU6 1953 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 RELNP78509 3460 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 A0A1B0GTQ1 180 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 CCDC196A0A1B0GTZ2 297 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 BTBD18B2RXH4 712 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 LYPLA2O95372 231 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 EGR2P11161 476 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 XRCC6P12956 609 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 SLC6A4P31645 630 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 ZNF132P52740 706 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 C21orf59P57076 290 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 NLRP5P59047 1200 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 AKAP17AQ02040 695 aaKnown RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 GAD2Q05329 585 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 CTTNQ14247 550 aaKnown RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 STARD3Q14849 445 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 RAB39AQ14964 217 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 PPP2R5AQ15172 486 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 IGFBP7Q16270 282 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 SMN1Q16637 294 aaKnown RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 C10orf76Q5T2E6 689 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 HIST2H2BCQ6DN03 193 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 RHBDF2Q6PJF5 856 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 Q6YL49 198 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 METTL23Q86XA0 190 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 SFTPA1Q8IWL2 248 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 DCP1BQ8IZD4 617 aaKnown RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 MIER2Q8N344 545 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 ARL14EPQ8N8R7 260 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 IL17RDQ8NFM7 739 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 ASB10Q8WXI3 467 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 C18orf25Q96B23 403 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 MOCOSQ96EN8 888 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 MRGPRX4Q96LA9 322 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 ZMAT2Q96NC0 199 aaKnown RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 GALNT9Q9HCQ5 603 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 SYBUQ9NX95 663 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 RGL1Q9NZL6 768 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 TBC1D14Q9P2M4 693 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 DDX25Q9UHL0 483 aaKnown RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 TNFSF13BQ9Y275 285 aa6.18□□□□□ -1.42
ATXN3-223ENST00000553686 SETD2Q9BYW2 2564 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 COL5A1P20908 1838 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-223ENST00000553686 MYH6P13533 1939 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 CABIN1Q9Y6J0 2220 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 NUP205Q92621 2012 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 ZBTB43O43298 467 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 EDIL3O43854 480 aa6.17□□□□□ -1.42
ATXN3-223ENST00000553686 USP12O75317 370 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms