RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 OAZ1P54368 228 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 BCAT1P54687 386 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 FOXA1P55317 472 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 MBTD1Q05BQ5 628 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 INCA1Q0VD86 236 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 LAMC2Q13753 1193 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GRB7Q14451 532 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 OXA1LQ15070 435 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GTF2IRD2BQ6EKJ0 949 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TWF2Q6IBS0 349 aaKnown RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ESRP1Q6NXG1 681 aaKnown RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 HFE2Q6ZVN8 426 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GTF2IRD2Q86UP8 949 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 HS3ST5Q8IZT8 346 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ANKRD52Q8NB46 1076 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 PCYOX1LQ8NBM8 494 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ABHD11Q8NFV4 315 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ZFP90Q8TF47 636 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 RNF139Q8WU17 664 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 DUS3LQ96G46 650 aaKnown RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TMEM74Q96NL1 305 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ATXN3LQ9H3M9 355 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 FZD8Q9H461 694 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 VRTNQ9H8Y1 702 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 PRDM8Q9NQV8 689 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ARMC1Q9NVT9 282 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 AASSQ9UDR5 926 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GTF2IRD1Q9UHL9 959 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 BCAP29Q9UHQ4 241 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 CROTQ9UKG9 612 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TLK1Q9UKI8 766 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ADAM28Q9UKQ2 775 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 DSEQ9UL01 958 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 FZD10Q9ULW2 581 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 VWA7Q9Y334 891 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TIMM13Q9Y5L4 95 aaPredicted RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 NOX1Q9Y5S8 564 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GPC6Q9Y625 555 aaPredicted RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 H3BMM5 538 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 H3BRB1 525 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 NR5A2O00482 541 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 CCL22O00626 93 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SLC22A2O15244 555 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 INPP4BO15327 924 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SNAP91O60641 907 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 CLPXO76031 633 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 AP2A1O95782 977 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 CCNA2P20248 432 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 EEF1B2P24534 225 aaKnown RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TGFBR1P36897 503 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GLUD2P49448 558 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 PLA2G16P53816 162 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SNX16P57768 344 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TNFAIP2Q03169 654 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SPIDRQ14159 915 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 CSHL1Q14406 222 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 POU6F1Q14863 301 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ATP6AP1Q15904 470 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TRIM16LQ309B1 348 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 LBX2Q6XYB7 198 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ARHGAP36Q6ZRI8 547 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SLC16A12Q6ZSM3 486 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 LDB1Q86U70 411 aaPredicted RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 CAMK1DQ8IU85 385 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 DDIASQ8IXT1 998 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 DEFB106AQ8N104 65 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TMCO5AQ8N6Q1 288 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ANKRD49Q8WVL7 239 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TRUB1Q8WWH5 349 aaKnown RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 VPS33AQ96AX1 596 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 FKBP10Q96AY3 582 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SLC10A4Q96EP9 437 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ITCHQ96J02 903 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SNX27Q96L92 541 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 ZMAT2Q96NC0 199 aaKnown RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 KCNA7Q96RP8 456 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SEPHS2Q99611 448 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GPR20Q99678 358 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 OLFM1Q99784 485 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 DGCR6LQ9BY27 220 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 GOLGA2P5Q9HBQ8 144 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 SCUBE2Q9NQ36 999 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 CASS4Q9NQ75 786 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 EIF2B3Q9NR50 452 aaKnown RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 TUBA8Q9NY65 449 aaPredicted RBP4.87□□□□□ -1.63
LIMA1-214ENST00000552783 VTI1BQ9UEU0 232 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 DAPK2Q9UIK4 370 aa4.87□□□□□ -1.63
LIMA1-214ENST00000552783 PITPNM1O00562 1244 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ARPC2O15144 300 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 SEC14L2O76054 403 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 RASAL1O95294 804 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CTSHP09668 335 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 PCNAP12004 261 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CYP2B6P20813 491 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 AGXTP21549 392 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 GPX3P22352 226 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 HTR1BP28222 390 aa4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ADSLP30566 484 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 ARL1P40616 181 aaPredicted RBP4.86□□□□□ -1.63
LIMA1-214ENST00000552783 CHRNA4P43681 627 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms