RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 MCCC1Q96RQ3 725 aaPredicted RBP18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 RBM15Q96T37 977 aaKnown RBP eCLIP18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 HERPUD2Q9BSE4 406 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 ADGRE3Q9BY15 652 aa18.54■□□□□ 0.56
PRPF40B-216ENST00000552301 NPIPB15A6NHN6 443 aaPredicted RBP18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 SH3BP5O60239 455 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 PCDHGA12O60330 932 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 FZD6O60353 706 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 RECQL5O94762 991 aaPredicted RBP18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 HEXIM1O94992 359 aaKnown RBP18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 KCNK5O95279 499 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 PCCBP05166 539 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 ITGAVP06756 1048 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 RBP3P10745 1247 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 EPHA8P29322 1005 aaPredicted RBP18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 WASHC5Q12768 1159 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 PDE1CQ14123 709 aaPredicted RBP18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 PTK2BQ14289 1009 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 SLC14A2Q15849 920 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 CNGA3Q16281 694 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 LRRK1Q38SD2 2015 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 CCDC70Q6NSX1 233 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 PID1Q7Z2X4 250 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 IFT43Q96FT9 208 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 IMP4Q96G21 291 aaKnown RBP18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 KCTD5Q9NXV2 234 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 TRHDEQ9UKU6 1024 aa18.53■□□□□ 0.56
PRPF40B-216ENST00000552301 SPTBN2O15020 2390 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 DMXL1Q9Y485 3027 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 A0A0J9YYE9 177 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 CAPN8A6NHC0 703 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 GOLGA8CPA6NN73 597 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 PSMD11O00231 422 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 TOR1BO14657 336 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 TRBC1P01850 177 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 MMP2P08253 660 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 ALPIP09923 528 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 CEACAM1P13688 526 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 NFKB1P19838 968 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 RBL1P28749 1068 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 GRK6P43250 576 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 RXRGP48443 463 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 PFN3P60673 137 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 YPEL5P62699 121 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 AGERQ15109 404 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 PCSK7Q16549 785 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 WSCD2Q2TBF2 565 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 ITPRIPL1Q6GPH6 555 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 PIP4P1Q86T03 277 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 PARGQ86W56 976 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 SLC22A18ASQ8N1D0 253 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 NUS1Q96E22 293 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 FAM118BQ9BPY3 351 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 MBNL1Q9NR56 388 aaKnown RBP18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 RSPH14Q9UHP6 348 aa18.52■□□□□ 0.56
PRPF40B-216ENST00000552301 H3BM21 787 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 ZSCAN12O43309 604 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 PMPCBO75439 489 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 ZNF30P17039 623 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 LHCGRP22888 699 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 HTR1BP28222 390 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 HNF1BP35680 557 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 MTM1Q13496 603 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 IHHQ14623 411 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 FAM182AQ5T1J6 154 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 MEI1Q5TIA1 1274 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 LRRC66Q68CR7 880 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 TSPAN33Q86UF1 283 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 GATAD2AQ86YP4 633 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 ZNF567Q8N184 647 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 RHBDD1Q8TEB9 315 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 MLPHQ9BV36 600 aaPredicted RBP18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 DNAJC28Q9NX36 388 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 FAM153AQ9UHL3 310 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 PPIL1Q9Y3C6 166 aa18.51■□□□□ 0.55
PRPF40B-216ENST00000552301 SPTY2D1-AS1A0A0U1RR47 76 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 GOLGA6CA6NDK9 693 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 GOLGA6BA6NDN3 693 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 KCNN4O15554 427 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 MT-CYBP00156 380 aaPredicted RBP18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 PRLP01236 227 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 GOLGA6DP0CG33 693 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 CDK18Q07002 472 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 GALNT3Q14435 633 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 KDM7AQ6ZMT4 941 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 KDELC2Q7Z4H8 507 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 ATL2Q8NHH9 583 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 SPATA22Q8NHS9 363 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 COQ10AQ96MF6 247 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 CARD9Q9H257 536 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 C10orf88Q9H8K7 445 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 GPR27Q9NS67 375 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 GOLGA6AQ9NYA3 693 aa18.5■□□□□ 0.55
PRPF40B-216ENST00000552301 PCNX2A6NKB5 2137 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 C1orf232A0A0U1RR37 186 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 ANKRD66B4E2M5 251 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 F5H423 210 aaPredicted RBP18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 CACNB4O00305 520 aaPredicted RBP18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 GIPC1O14908 333 aa18.49■□□□□ 0.55
PRPF40B-216ENST00000552301 SDC3O75056 442 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms