RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 OR56A4Q8NGH8 313 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 JPH3Q8WXH2 748 aaPredicted RBP16.54■□□□□ 0.24
SSH1-208ENST00000548522 MCEEQ96PE7 176 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 ARHGAP9Q9BRR9 750 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 VPS16Q9H269 839 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 SUDS3Q9H7L9 328 aaPredicted RBP16.54■□□□□ 0.24
SSH1-208ENST00000548522 LRIT1Q9P2V4 623 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 ANKRD36A6QL64 1941 aa16.54■□□□□ 0.24
SSH1-208ENST00000548522 A8MX80 341 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 PRAMEF11O60813 436 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 ITGB2P05107 769 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 CCL4P13236 92 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 EEF1GP26641 437 aaKnown RBP16.53■□□□□ 0.24
SSH1-208ENST00000548522 ZNF143P52747 638 aaPredicted RBP16.53■□□□□ 0.24
SSH1-208ENST00000548522 OGDHQ02218 1023 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 CLCA4Q14CN2 919 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 STX1AQ16623 288 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 TBR1Q16650 682 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 MAP9Q49MG5 647 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 SPECC1LQ69YQ0 1117 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 TRIM72Q6ZMU5 477 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 ARHGAP36Q6ZRI8 547 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 DTX1Q86Y01 620 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 PHF13Q86YI8 300 aaPredicted RBP16.53■□□□□ 0.24
SSH1-208ENST00000548522 OR6C4Q8NGE1 309 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 HCAR2Q8TDS4 363 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 PTCD2Q8WV60 388 aaKnown RBP16.53■□□□□ 0.24
SSH1-208ENST00000548522 ZNF641Q96N77 438 aaPredicted RBP16.53■□□□□ 0.24
SSH1-208ENST00000548522 DPEP2Q9H4A9 486 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 CYP4F12Q9HCS2 524 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 IL17BQ9UHF5 180 aa16.53■□□□□ 0.24
SSH1-208ENST00000548522 SIGLEC16A6NMB1 481 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 CACNB4O00305 520 aaPredicted RBP16.52■□□□□ 0.24
SSH1-208ENST00000548522 B4GAT1O43505 415 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 ARSDP51689 593 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 OR1D5P58170 312 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 TPI1P60174 286 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 B4GALNT1Q00973 533 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 KRT31Q15323 416 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 CA9Q16790 459 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 AMZ1Q400G9 498 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 PPP1R15BQ5SWA1 713 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 DNAJC24Q6P3W2 148 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 LIPIQ6XZB0 460 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 RCBTB1Q8NDN9 531 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 ATL2Q8NHH9 583 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 ECHDC3Q96DC8 303 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 CMKLR1Q99788 373 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 NUDT22Q9BRQ3 303 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 SLC39A8Q9C0K1 460 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 CATSPERBQ9H7T0 1116 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 SPATS2LQ9NUQ6 558 aaKnown RBP16.52■□□□□ 0.24
SSH1-208ENST00000548522 MOSPD1Q9UJG1 213 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 SIK3Q9Y2K2 1263 aa16.52■□□□□ 0.24
SSH1-208ENST00000548522 TTC24A2A3L6 582 aaPredicted RBP16.51■□□□□ 0.23
SSH1-208ENST00000548522 FGF10O15520 208 aaPredicted RBP16.51■□□□□ 0.23
SSH1-208ENST00000548522 CALB1P05937 261 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 ELFN1P0C7U0 828 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 PAPOLAP51003 745 aaKnown RBP16.51■□□□□ 0.23
SSH1-208ENST00000548522 ARHGEF7Q14155 803 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 SRLQ86TD4 932 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 NRROSQ86YC3 692 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 NPWQ8N729 165 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 RNF214Q8ND24 703 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 PATE1Q8WXA2 126 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 TUBGCP5Q96RT8 1024 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 BPIFA3Q9BQP9 254 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 WDR26Q9H7D7 661 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 ATP13A3Q9H7F0 1226 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 SEPT11Q9NVA2 429 aaKnown RBP16.51■□□□□ 0.23
SSH1-208ENST00000548522 ST14Q9Y5Y6 855 aa16.51■□□□□ 0.23
SSH1-208ENST00000548522 UNC13CQ8NB66 2214 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 PRSS38A1L453 326 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 TEX33O43247 280 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 SUV39H1O43463 412 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 NUDT21O43809 227 aaKnown RBP16.5■□□□□ 0.23
SSH1-208ENST00000548522 FUCA1P04066 466 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 PNLIPP16233 465 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 SERPINA4P29622 427 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 STAT1P42224 750 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 GRM3Q14832 879 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 CDKAL1Q5VV42 579 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 AFMIDQ63HM1 303 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 ZNF574Q6ZN55 896 aaPredicted RBP16.5■□□□□ 0.23
SSH1-208ENST00000548522 DPPA4Q7L190 304 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 ARHGAP12Q8IWW6 846 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 TP53INP2Q8IXH6 220 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 PEBP4Q96S96 227 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 CNPY3Q9BT09 278 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 CARS2Q9HA77 564 aaKnown RBP16.5■□□□□ 0.23
SSH1-208ENST00000548522 SEPT10Q9P0V9 454 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
SSH1-208ENST00000548522 LRRK2Q5S007 2527 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 A0A1W2PQC6 194 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
SSH1-208ENST00000548522 TNFRSF10CO14798 259 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 PALMO75781 387 aa16.49■□□□□ 0.23
SSH1-208ENST00000548522 AK4P27144 223 aaPredicted RBP16.49■□□□□ 0.23
SSH1-208ENST00000548522 ALDH4A1P30038 563 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms