RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 POU4F1Q01851 419 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 PTPRRQ15256 657 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 EML3Q32P44 896 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 CCDC153Q494R4 210 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 OTOAQ7RTW8 1153 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 GPR149Q86SP6 731 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 LDB1Q86U70 411 aaPredicted RBP19.88■□□□□ 0.77
COPS7A-218ENST00000543939 NUDCD3Q8IVD9 361 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 CEP97Q8IW35 865 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 EFHBQ8N7U6 833 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 FGF13Q92913 245 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 ASB16Q96NS5 453 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 OMDQ99983 421 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 C1QTNF1Q9BXJ1 281 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 TLK1Q9UKI8 766 aa19.88■□□□□ 0.77
COPS7A-218ENST00000543939 BPTFQ12830 3046 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 OGNP20774 298 aaKnown RBP19.87■□□□□ 0.77
COPS7A-218ENST00000543939 CRABP2P29373 138 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 TAS2R39P59534 338 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 IRX4P78413 519 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 TAF1BQ53T94 588 aaPredicted RBP19.87■□□□□ 0.77
COPS7A-218ENST00000543939 RBM20Q5T481 1227 aaKnown RBP19.87■□□□□ 0.77
COPS7A-218ENST00000543939 TMEM215Q68D42 235 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 MRNIPQ6NTE8 343 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 TMEM184AQ6ZMB5 413 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 RAPH1Q70E73 1250 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 LCA5Q86VQ0 697 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 PCDH20Q8N6Y1 951 aaKnown RBP19.87■□□□□ 0.77
COPS7A-218ENST00000543939 NAT16Q8N8M0 369 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 ANKS4BQ8N8V4 417 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 PNPLA1Q8N8W4 532 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 GPATCH11Q8N954 259 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 CCDC63Q8NA47 563 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 RAB3IL1Q8TBN0 382 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 PPP2R3CQ969Q6 453 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 ATP13A3Q9H7F0 1226 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 MAGEE1Q9HCI5 957 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 CATSPERZQ9NTU4 200 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.87■□□□□ 0.77
COPS7A-218ENST00000543939 MYO9BQ13459 2157 aa19.87■□□□□ 0.77
COPS7A-218ENST00000543939 PRRC2BQ5JSZ5 2229 aaKnown RBP19.86■□□□□ 0.77
COPS7A-218ENST00000543939 KIF26AQ9ULI4 1882 aaPredicted RBP19.86■□□□□ 0.77
COPS7A-218ENST00000543939 IL1BP01584 269 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 COL6A2P12110 1019 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 STMN1P16949 149 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 PGGT1BP53609 377 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 ILF2Q12905 390 aaKnown RBP19.86■□□□□ 0.77
COPS7A-218ENST00000543939 SEMA3AQ14563 771 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 MYLK3Q32MK0 819 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 MBLAC2Q68D91 279 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 AFTPHQ6ULP2 937 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 AHI1Q8N157 1196 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 BPIFB1Q8TDL5 484 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 SMARCD2Q92925 531 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 E2F7Q96AV8 911 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 ASIC4Q96FT7 647 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 POLR3BQ9NW08 1133 aaPredicted RBP19.86■□□□□ 0.77
COPS7A-218ENST00000543939 SLCO3A1Q9UIG8 710 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 ZNF711Q9Y462 761 aa19.86■□□□□ 0.77
COPS7A-218ENST00000543939 TRIM24O15164 1050 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 HOXC11O43248 304 aaPredicted RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 ADH5P11766 374 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 ALDH3A1P30838 453 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 PCLAFQ15004 111 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CHI3L2Q15782 390 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 TYSND1Q2T9J0 566 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 FASTKD1Q53R41 847 aaKnown RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 TRIM68Q6AZZ1 485 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 RYBPQ8N488 228 aaPredicted RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 TUBGCP5Q96RT8 1024 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 NDNQ99608 321 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 APOL5Q9BWW9 433 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 TSSK1BQ9BXA7 367 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 GDE1Q9NZC3 331 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 HECAQ9UBI9 543 aaPredicted RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 ACOT9Q9Y305 439 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 SCN8AQ9UQD0 1980 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 STX7O15400 261 aaKnown RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 SLC4A1P02730 911 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 ALPIP09923 528 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CISD3P0C7P0 127 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CTPS1P17812 591 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 SERPINA4P29622 427 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 HYAL1Q12794 435 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 IFT88Q13099 833 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 ZNF460Q14592 562 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 GEN1Q17RS7 908 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CARD16Q5EG05 197 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 TCEAL5Q5H9L2 206 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CES4AQ5XG92 561 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 ATG16L1Q676U5 607 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 SDCCAG8Q86SQ7 713 aaPredicted RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CENPLQ8N0S6 344 aaPredicted RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 SCG3Q8WXD2 468 aaKnown RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 OLFM1Q99784 485 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CPEB1Q9BZB8 566 aaKnown RBP19.85■□□□□ 0.77
COPS7A-218ENST00000543939 TRPV4Q9HBA0 871 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 COPG2Q9UBF2 871 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 CDH22Q9UJ99 828 aa19.85■□□□□ 0.77
COPS7A-218ENST00000543939 ERVW-1Q9UQF0 538 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms