RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ESRP1Q6NXG1 681 aaKnown RBP10.7□□□□□ -0.7
DDB1-221ENST00000543162 ERAP2Q6P179 960 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 FBXL19Q6PCT2 694 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 LRIG3Q6UXM1 1119 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 PARS2Q7L3T8 475 aaKnown RBP10.7□□□□□ -0.7
DDB1-221ENST00000543162 LYSMD3Q7Z3D4 306 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 ZNF687Q8N1G0 1237 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 SYNPOQ8N3V7 929 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 TTC30BQ8N4P2 665 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 MDGA1Q8NFP4 955 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 OR2W6PQ8NHA6 318 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 STYXQ8WUJ0 223 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 PEX13Q92968 403 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 ARRDC3Q96B67 414 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 ZIM3Q96PE6 472 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 MCCC1Q96RQ3 725 aaPredicted RBP10.7□□□□□ -0.7
DDB1-221ENST00000543162 LYSMD1Q96S90 227 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 RUFY1Q96T51 708 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 CYTH2Q99418 400 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 ACBD3Q9H3P7 528 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 ACSS3Q9H6R3 686 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 LMAN1LQ9HAT1 526 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 LTB4R2Q9NPC1 389 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 PCDH12Q9NPG4 1184 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 PPANQ9NQ55 473 aaKnown RBP10.7□□□□□ -0.7
DDB1-221ENST00000543162 TREX1Q9NSU2 369 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 SLC2A6Q9UGQ3 507 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 MUTYHQ9UIF7 546 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 RABGEF1Q9UJ41 708 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 RIMKLBQ9ULI2 386 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 MMP17Q9ULZ9 603 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 KCTD3Q9Y597 815 aa10.7□□□□□ -0.7
DDB1-221ENST00000543162 ZCWPW2A0A1B0GU75 182 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 EXOC1LA0A1B0GW35 172 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 A0A1W2PQF6 199 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 FAM170BA6NMN3 283 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 A8MX80 341 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 STK25O00506 426 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 STX7O15400 261 aaKnown RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 SASH3O75995 380 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 ALDH1A2O94788 518 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 VAPBO95292 243 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 IVLP07476 585 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 COL9A1P20849 921 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 C5AR1P21730 350 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 VIPR1P32241 457 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 NEK3P51956 506 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 ZNF140P52738 457 aaPredicted RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 COPAP53621 1224 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 RPS14P62263 151 aaKnown RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 PRAMEP78395 509 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 SEMG2Q02383 582 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 MGAT5Q09328 741 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 KLHL38Q2WGJ6 581 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 PDPK2PQ6A1A2 396 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 KIAA0930Q6ICG6 404 aaPredicted RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 TRMT10BQ6PF06 316 aaKnown RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 CRTC1Q6UUV9 634 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 Q6ZS52 159 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 CYS1Q717R9 158 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 ERN2Q76MJ5 926 aaKnown RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 CACUL1Q86Y37 369 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 OR4K2Q8NGD2 314 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 CDKL2Q92772 493 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 PBXIP1Q96AQ6 731 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 CERS2Q96G23 380 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 DNAJC1Q96KC8 554 aaKnown RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 HDAC8Q9BY41 377 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 FOXQ1Q9C009 403 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 TBC1D17Q9HA65 648 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 ZFYVE1Q9HBF4 777 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 CD320Q9NPF0 282 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 C20orf96Q9NUD7 363 aaPredicted RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 NLE1Q9NVX2 485 aaPredicted RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 POLR3BQ9NW08 1133 aaPredicted RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 MOCS1Q9NZB8 636 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 B4GALT6Q9UBX8 382 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 PKP3Q9Y446 797 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 MTF2Q9Y483 593 aaPredicted RBP10.69□□□□□ -0.7
DDB1-221ENST00000543162 NFS1Q9Y697 457 aa10.69□□□□□ -0.7
DDB1-221ENST00000543162 A0A0U1RQS6 177 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 FAM159BA6NKW6 160 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 CHURC1-FNTBB4DL54 471 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 POC1B-GALNT4F8VUJ3 575 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 PLK4O00444 970 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 CCL22O00626 93 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 MID1O15344 667 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 SLC7A4O43246 635 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ATG13O75143 517 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 RPP40O75818 363 aaKnown RBP10.68□□□□□ -0.7
DDB1-221ENST00000543162 CLDN7O95471 211 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 DNTTP04053 509 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ERVK-10P10266 1014 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ADRB3P13945 408 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 HMGCLP35914 325 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 HADHAP40939 763 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 P2RY2P41231 377 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 TMPRSS15P98073 1019 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ACVR1Q04771 509 aa10.68□□□□□ -0.7
DDB1-221ENST00000543162 ZNF844Q08AG5 666 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms