RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SYNDIG1Q9H7V2 258 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZNHIT6Q9NWK9 470 aaKnown RBP8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 MPP6Q9NZW5 540 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 ZNF212Q9UDV6 495 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 OR12D3Q9UGF7 316 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 FZD10Q9ULW2 581 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 PADI4Q9UM07 663 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 ERVW-1Q9UQF0 538 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 HS3ST3A1Q9Y663 406 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 MTORP42345 2549 aa8.97□□□□□ -0.97
TRAPPC1-202ENST00000540486 SPTY2D1-AS1A0A0U1RR47 76 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 A0A1B0GTL3 188 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 ZNF891A8MT65 544 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 AKR1B10O60218 316 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 TPM1P09493 284 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 ITIH1P19827 911 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 PSMA2P25787 234 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 ITGB7P26010 798 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 CTSOP43234 321 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 NUMBP49757 651 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 PLK1P53350 603 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 CDH4P55283 916 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 NRG1Q02297 640 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 FGL2Q14314 439 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 DEFB133Q30KQ1 61 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 RABGAP1LQ5R372 815 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 MANEALQ5VSG8 457 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 ESRP1Q6NXG1 681 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 SCYL2Q6P3W7 929 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 Q6ZSR6 202 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 CYP4V2Q6ZWL3 525 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 TIPARPQ7Z3E1 657 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 SLFN11Q7Z7L1 901 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 PARGQ86W56 976 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 SLC35F3Q8IY50 421 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 BTN2A2Q8WVV5 523 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 NKD1Q969G9 470 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 TRIM11Q96F44 468 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 CCDC42Q96M95 316 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 PEBP4Q96S96 227 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 CMKLR1Q99788 373 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 FOXP3Q9BZS1 431 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 MRPL47Q9HD33 250 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 GPR27Q9NS67 375 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 SPTLC3Q9NUV7 552 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 FOXJ2Q9P0K8 574 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 PPARGC1AQ9UBK2 798 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 NEU3Q9UQ49 428 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 TBC1D30Q9Y2I9 924 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 MAP4K5Q9Y4K4 846 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 OR51B4Q9Y5P0 310 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 NAV3Q8IVL0 2385 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 TDRD6O60522 2096 aaKnown RBP8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 ESPL1Q14674 2120 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 HIVEP1P15822 2718 aa8.96□□□□□ -0.98
TRAPPC1-202ENST00000540486 A0A0D9SEW6 157 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 TTC24A2A3L6 582 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 TYW5A2RUC4 315 aaKnown RBP8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 TCAF2A6NFQ2 919 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 A6NNZ2 444 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 EFCAB7A8K855 629 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 C9orf172C9J069 976 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 CASC3O15234 703 aaKnown RBP8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 LRCH4O75427 683 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 LRIG2O94898 1065 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 MOCS3O95396 460 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 LCA5LO95447 670 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 H2AFZP0C0S5 128 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 TCF4P15884 667 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 PRLRP16471 622 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 IL1R2P27930 398 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 MIPP30301 263 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 L1CAMP32004 1257 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 NNMTP40261 264 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 ZFP36L1Q07352 338 aaKnown RBP8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 CCDC15Q0P6D6 951 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 CDH18Q13634 790 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 FZD2Q14332 565 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 CA9Q16790 459 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 PITRM1Q5JRX3 1037 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 ACBD5Q5T8D3 534 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 AGBL4Q5VU57 503 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 RNF219Q5W0B1 726 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 TCTN3Q6NUS6 607 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 LRRC31Q6UY01 552 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 H2AFVQ71UI9 128 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 NLRP14Q86W24 1093 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 CPNE8Q86YQ8 564 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 IL22RA1Q8N6P7 574 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 CPT1CQ8TCG5 803 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 LMX1AQ8TE12 382 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 MYOCQ99972 504 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 FEM1AQ9BSK4 669 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 NUP85Q9BW27 656 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 DEF6Q9H4E7 631 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 CAAP1Q9H8G2 361 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 GPATCH2LQ9NWQ4 482 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 SPASTQ9UBP0 616 aa8.95□□□□□ -0.98
TRAPPC1-202ENST00000540486 PCSK1NQ9UHG2 260 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms