RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 BMP4P12644 408 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 AGXTP21549 392 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 IL32P24001 234 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 GPD2P43304 727 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 SCRN3Q0VDG4 424 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 MBLAC2Q68D91 279 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 URGCPQ8TCY9 931 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 AFG1LQ8WV93 481 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 PIGBQ92521 554 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 COMMD8Q9NX08 183 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 POLIQ9UNA4 740 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 COPG1Q9Y678 874 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 TARBP1Q13395 1621 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 ANKRD26Q9UPS8 1709 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 IFT172Q9UG01 1749 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 TMEM94Q12767 1356 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 H3BM21 787 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 MSI1O43347 362 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 IL2RBP14784 551 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 RRM2P31350 389 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 HNF4AP41235 474 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 IDH2P48735 452 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 SELENBP1Q13228 472 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 SVOPQ8N4V2 548 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 OR52K1Q8NGK4 314 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 OLA1Q9NTK5 396 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 BFARQ9NZS9 450 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 HCN4Q9Y3Q4 1203 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 PRAMEF33A0A0G2JMD5 474 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 A0A0J9YYE9 177 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 PRAMEF10O60809 474 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 BCAS1O75363 584 aaPredicted RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 DGKEP52429 567 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 TAP1Q03518 808 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 NPTX1Q15818 432 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 RMDN3Q96TC7 470 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 BEX1Q9HBH7 125 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 AFF4Q9UHB7 1163 aaKnown RBP11.11□□□□□ -0.63
PBX1-212ENST00000540236 NUP50Q9UKX7 468 aa11.11□□□□□ -0.63
PBX1-212ENST00000540236 TRIM64A6NGJ6 449 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 TRIM64BA6NI03 449 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 H3BMM5 538 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 BCKDKO14874 412 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 TXNRD3Q86VQ6 643 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 SNTG1Q9NSN8 517 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 TAS2R9Q9NYW1 312 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 CYB5R1Q9UHQ9 305 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 MAU2Q9Y6X3 613 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 SDC4P31431 198 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 CPOXP36551 454 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 MARSP56192 900 aaKnown RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 SQLEQ14534 574 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 COQ8AQ8NI60 647 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 GPR88Q9GZN0 384 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 ING4Q9UNL4 249 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 ANGPTL1O95841 491 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 DSG2Q14126 1118 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 GRM3Q14832 879 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 AMHR2Q16671 573 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 NEPROQ6NW34 567 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 FAM92BQ6ZTR7 304 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 SNX20Q7Z614 316 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 CEP76Q8TAP6 659 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 BRSK1Q8TDC3 778 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 CGREF1Q99674 301 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 SEMA4BQ9NPR2 832 aaPredicted RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 PADI4Q9UM07 663 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 HES2Q9Y543 173 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 MAGED1Q9Y5V3 778 aaPredicted RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 PEAK1Q9H792 1746 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 AP2A2O94973 939 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 KCNC1P48547 511 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 PCLAFQ15004 111 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 ZNF773Q6PK81 442 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 IL1RAPQ9NPH3 570 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 RIMS3Q9UJD0 308 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 MTRF1O75570 445 aaKnown RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 BCAS2O75934 225 aaPredicted RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 NNMTP40261 264 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 MAZP56270 477 aaKnown RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 IL18Q14116 193 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 AGAP9Q5VTM2 703 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 RHBDF2Q6PJF5 856 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 SV2AQ7L0J3 742 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 OTOP2Q7RTS6 562 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 LYSMD3Q7Z3D4 306 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 KCNMB4Q86W47 210 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 OSTM1Q86WC4 334 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 FAM71AQ8IYT1 594 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 TMEM245Q9H330 911 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 ATXN3LQ9H3M9 355 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
PBX1-212ENST00000540236 RIMKLBQ9ULI2 386 aa11.1□□□□□ -0.63
PBX1-212ENST00000540236 DUSP12Q9UNI6 340 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms