RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CSHL1Q14406 222 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 POU6F1Q14863 301 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ACAP2Q15057 778 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PPP1R3AQ16821 1122 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 COQ5Q5HYK3 327 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 TMTC4Q5T4D3 741 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ZNF470Q6ECI4 717 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 LARP4Q71RC2 724 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 OTOP3Q7RTS5 596 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 EPHX4Q8IUS5 362 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ZNF786Q8N393 782 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 MINDY1Q8N5J2 469 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 IPMKQ8NFU5 416 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 DNAJB3Q8WWF6 145 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 RSPH1Q8WYR4 309 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 L3HYPDHQ96EM0 354 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ASB2Q96Q27 587 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 CYP2S1Q96SQ9 504 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 COLEC11Q9BWP8 271 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 NPLQ9BXD5 320 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-218ENST00000537641 AGPAT4Q9NRZ5 378 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 SMOXQ9NWM0 555 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 ACTR3BQ9P1U1 418 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 EBF1Q9UH73 591 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 TRAF6Q9Y4K3 522 aa12.2□□□□□ -0.46
CPSF7-218ENST00000537641 NEMP2A6NFY4 417 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 TRIM64BA6NI03 449 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 SAC3D1A6NKF1 404 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 YJEFN3A6XGL0 299 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 LRIG2O94898 1065 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 RASAL1O95294 804 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 GPIP06744 558 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 ZNF865P0CJ78 1059 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-218ENST00000537641 IMPDH1P20839 514 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 GPX3P22352 226 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 AKAP5P24588 427 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 HTR7P34969 479 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 SLC26A3P40879 764 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 STT3AP46977 705 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 MAP3K7CLP57077 242 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 PRAMEP78395 509 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 NFKB2Q00653 900 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 RAB41Q5JT25 222 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 SPATA6LQ8N4H0 392 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 CBR4Q8N4T8 237 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 ATPAF2Q8N5M1 289 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 TMEM40Q8WWA1 233 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 CENPNQ96H22 339 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-218ENST00000537641 MYRFLQ96LU7 910 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 CYP4F12Q9HCS2 524 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 TBC1D13Q9NVG8 400 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 CPA4Q9UI42 421 aa12.19□□□□□ -0.46
CPSF7-218ENST00000537641 NME4O00746 187 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 GABRDO14764 452 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 TNPO2O14787 897 aaKnown RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 MAGEB3O15480 346 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 NCAM1P13591 858 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 LEPRP48357 1165 aaKnown RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 CRYBB1P53674 252 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 UBXN11Q5T124 520 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 RBM20Q5T481 1227 aaKnown RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 NEPROQ6NW34 567 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 ELMSAN1Q6PJG2 1045 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 ABRAXAS1Q6UWZ7 409 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 LYSMD3Q7Z3D4 306 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 FUNDC1Q8IVP5 155 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 ZBTB8BQ8NAP8 495 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 SPATA22Q8NHS9 363 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 PNPT1Q8TCS8 783 aaKnown RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 C19orf60Q96EN9 201 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 TUBA1CQ9BQE3 449 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 KATNAL1Q9BW62 490 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 TKTL2Q9H0I9 626 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 WDCPQ9H6R7 721 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 RPF2Q9H7B2 306 aaKnown RBP12.18□□□□□ -0.46
CPSF7-218ENST00000537641 PALMDQ9NP74 551 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 TNFRSF12AQ9NP84 129 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 GID8Q9NWU2 228 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 FLRT1Q9NZU1 646 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 OR12D3Q9UGF7 316 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 Q9Y3F1 56 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 PTCH2Q9Y6C5 1203 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 TRPM7Q96QT4 1865 aa12.18□□□□□ -0.46
CPSF7-218ENST00000537641 A0A0J9YYE9 177 aa12.17□□□□□ -0.46
CPSF7-218ENST00000537641 TTC24A2A3L6 582 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-218ENST00000537641 GIPC1O14908 333 aa12.17□□□□□ -0.46
CPSF7-218ENST00000537641 TREHO43280 583 aa12.17□□□□□ -0.46
CPSF7-218ENST00000537641 SNAP91O60641 907 aa12.17□□□□□ -0.46
CPSF7-218ENST00000537641 CELF2O95319 508 aaKnown RBP12.17□□□□□ -0.46
CPSF7-218ENST00000537641 WISP3O95389 354 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-218ENST00000537641 MATN4O95460 622 aa12.17□□□□□ -0.46
CPSF7-218ENST00000537641 ZNF12P17014 697 aa12.17□□□□□ -0.46
CPSF7-218ENST00000537641 KCNA5P22460 613 aa12.17□□□□□ -0.46
CPSF7-218ENST00000537641 TPP2P29144 1249 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms