RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 AFMIDQ63HM1 303 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 ZFP1Q6P2D0 407 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 CXCL17Q6UXB2 119 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 KIAA0408Q6ZU52 694 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 FATE1Q969F0 183 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 FCRL2Q96LA5 508 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 C1orf74Q96LT6 269 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 NSMCE3Q96MG7 304 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 SLC39A8Q9C0K1 460 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 NDEL1Q9GZM8 345 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 TMLHEQ9NVH6 421 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 MAGED2Q9UNF1 606 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 EIF3FO00303 357 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 AQP9O43315 295 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 BMP10O95393 424 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 POMCP01189 267 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 CAPNS1P04632 268 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 SLC2A3P11169 496 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 STMN1P16949 149 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 ZNF26P17031 533 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 XRCC1P18887 633 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 BRCC3P46736 316 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 GRIA4P48058 902 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 KIAA0930Q6ICG6 404 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 DENND5AQ6IQ26 1287 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 CD300LGQ6UXG3 332 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 TMEM151AQ8N4L1 468 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 IPMKQ8NFU5 416 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 SPATA22Q8NHS9 363 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 FICDQ9BVA6 458 aa18.01■□□□□ 0.47
RAB40C-203ENST00000535977 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-203ENST00000535977 GOLGA8QA0A0J9YX86 632 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 GOLGA8OA6NCC3 632 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 GOLGA8NF8WBI6 632 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 SLC35E2BP0CK96 405 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 RPL10P27635 214 aaKnown RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 GABRB3P28472 473 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 RCVRNP35243 200 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 ARCN1P48444 511 aaKnown RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 SLC9B1Q4ZJI4 515 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 MFSD14CQ5VZR4 134 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 LRRTM3Q86VH5 581 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 CARM1Q86X55 608 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 CPSF7Q8N684 471 aaKnown RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 RTL3Q8N8U3 475 aaKnown RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 CALML6Q8TD86 181 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 SERPINB11Q96P15 392 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 SERPINI1Q99574 410 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 FSD1LQ9BXM9 530 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 RBM22Q9NW64 420 aaKnown RBP eCLIP18■□□□□ 0.47
RAB40C-203ENST00000535977 SCHIP1Q9P0W5 487 aaPredicted RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 PRPF19Q9UMS4 504 aaKnown RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 RGSL1A5PLK6 1076 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 VAPBO95292 243 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 TFEBP19484 476 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 GMPRP36959 345 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 THOP1P52888 689 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 POU4F1Q01851 419 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 ZBED5Q49AG3 693 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 LRRC8EQ6NSJ5 796 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 TMEM102Q8N9M5 508 aaPredicted RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 OR10T2Q8NGX3 314 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 RP9Q8TA86 221 aaKnown RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 SCAMP5Q8TAC9 235 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 ZFYVE28Q9HCC9 887 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 GNPTGQ9UJJ9 305 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 PRSS51A0A1B0GVH4 220 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 A0A1W2PPW3 197 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 TARM1B6A8C7 271 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 TNFRSF10BO14763 440 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 NPHS1O60500 1241 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 CD1EP15812 388 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 GRIK1P39086 918 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 BMXP51813 675 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 HUNKP57058 714 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 ESRRGP62508 458 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 NR1D2Q14995 579 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 RGS21Q2M5E4 152 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 MGAT5BQ3V5L5 792 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 KRT80Q6KB66 452 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 C16orf89Q6UX73 402 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 RANBP10Q6VN20 620 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 ZBTB46Q86UZ6 589 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 FSTL5Q8N475 847 aaPredicted RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 C2CD4AQ8NCU7 369 aaPredicted RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 BHLHE22Q8NFJ8 381 aaPredicted RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 CLIP3Q96DZ5 547 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 TMEM79Q9BSE2 394 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 RPF2Q9H7B2 306 aaKnown RBP18■□□□□ 0.47
RAB40C-203ENST00000535977 ARNT2Q9HBZ2 717 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 ATAD3AQ9NVI7 634 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 PCDHB8Q9UN66 801 aa18■□□□□ 0.47
RAB40C-203ENST00000535977 KCNU1A8MYU2 1149 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 INPPL1O15357 1258 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 KLHL41O60662 606 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 MT-CYBP00156 380 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-203ENST00000535977 C8BP07358 591 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 CD52P31358 61 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 ABCG1P45844 678 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 BNIP3Q12983 259 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms